[Ncep.list.nems.announce] Follow-up commit to NEMS trunk for ticket #41 NUOPC/OCN integration
Gerhard Theurich
theurich at sourcespring.net
Fri Aug 30 14:06:31 UTC 2013
Hi Moorthi,
This looks like a mismatch between the NEMS configuration, and the ESMF
library loaded. What NEMS configuration are you using (i.e, what option
did you use with ./esmf_version)? Are you building NEMS by directly
calling "make <target>", or is this out of the regression suite? If you
are building directly, what modules do you have loaded (see "module
list")? Thanks,
-Gerhard
On 08/30/2013 05:32 AM, Shrinivas Moorthi wrote:
> All,
> I am trying to compile NEMS on zeus and I am getting errors (I guess
> for ESMF library)
>
> "ifort -lmpi -openmp -convert big_endian -assume byterecl
> -mkl=sequential "-g -check all -ftrapuv -stack-check -fstack-protector
> -heap-arrays -recursive" -I/contrib/nceplibs/nwprod/lib/incmod/nemsio
> -fp-model strict -c module_ERR_MSG.f90
> ifort: command line warning #10156: ignoring option '-g'; no argument
> required
> module_ERR_MSG.f90(61): error #7002: Error in opening the compiled
> module file. Check INCLUDE paths. [ESMF_MOD]"
>
> What am I missing?
> Thanks
> Moorthi
> On 08/23/2013 12:55 PM, Gerhard Theurich wrote:
>> Hi Nicole,
>>
>> Yes, the change was made consistently across _all_ build targets. You
>> can see them all by just typing "make" (without specifying a target).
>> This will print out the help message that shows the available targets.
>>
>> -Gerhard
>>
>> On 08/23/2013 09:48 AM, Nicole McKee - NOAA Affiliate wrote:
>>> Would the 'gsm' part also be used for other compilations, as well? Like
>>> 'gmake nmm_gsm', for example?
>>>
>>>
>>>
>>> Nicole McKee
>>> IMSG/NCEP-EMC Global Modeling Branch
>>> 301-683-3812
>>>
>>>
>>> On Wed, Aug 14, 2013 at 9:53 AM, Gerhard Theurich
>>> <theurich at sourcespring.net <mailto:theurich at sourcespring.net>> wrote:
>>>
>>> That is correct, in my last commit I was trying to more consistently
>>> move to using "gsm" instead of "gfs". One thing was to replace "gfs"
>>> with "gsm" in all of the NEMS build targets. Another was that the old
>>> "gfs" sub-directory was removed.
>>> -Gerhard
>>>
>>> On 08/14/2013 06:29 AM, Sarah Lu - NOAA Affiliate wrote:
>>> >
>>> > Gerhard changed it to 'gmake gsm'.
>>> >
>>> >
>>> > On Wed, Aug 14, 2013 at 9:22 AM, Shrinivas Moorthi - NOAA Federal
>>> > <shrinivas.moorthi at noaa.gov <mailto:shrinivas.moorthi at noaa.gov>
>>> <mailto:shrinivas.moorthi at noaa.gov
>>> <mailto:shrinivas.moorthi at noaa.gov>>> wrote:
>>> >
>>> > I haven't touched NEMS for a while and now I try to compile
>>> ans it
>>> > does not work.
>>> > I get
>>> > "gmake gfs GOCART_MODE=full
>>> > gmake: *** No rule to make target `gfs'. Stop."
>>> >
>>> > What am I doing wrong?
>>> > Thanks
>>> > Moorthi
>>> >
>>> >
>>> >
>>> > On Fri, Aug 9, 2013 at 7:17 PM, Sarah Lu - NOAA Affiliate
>>> > <sarah.lu at noaa.gov <mailto:sarah.lu at noaa.gov>
>>> <mailto:sarah.lu at noaa.gov <mailto:sarah.lu at noaa.gov>>> wrote:
>>> >
>>> >
>>> > Thanks to Gerhard, the NEMS trunk has been pointed to GSM at
>>> > R30692. The two trunk are in sync.
>>> >
>>> > Have a nice weekend to you all,
>>> > Sarah
>>> >
>>> >
>>> > On Fri, Aug 9, 2013 at 6:30 PM, Sarah Lu - NOAA Affiliate
>>> > <sarah.lu at noaa.gov <mailto:sarah.lu at noaa.gov>
>>> <mailto:sarah.lu at noaa.gov <mailto:sarah.lu at noaa.gov>>> wrote:
>>> >
>>> > Dear all --
>>> >
>>> > Both GSM and NEMS trunks have been updated (R30692
>>> for GSM
>>> > and R30711 for NEMS).
>>> >
>>> > However, I notice the NEMS's external link is pointed
>>> to GSM
>>> > trunk at R30596. Could someone please help me to
>>> sync the
>>> > code so the NEMS trunk can point to the tip of GSM trunk.
>>> >
>>> > Thanks,
>>> > Sarah
>>> >
>>> >
>>> > On Fri, Aug 9, 2013 at 1:13 PM, Sarah Lu - NOAA Affiliate
>>> > <sarah.lu at noaa.gov <mailto:sarah.lu at noaa.gov>
>>> <mailto:sarah.lu at noaa.gov <mailto:sarah.lu at noaa.gov>>> wrote:
>>> >
>>> > Dear All --
>>> >
>>> > Kate will update GSM trunk this afternoon, and
>>> I'll then
>>> > update the NEMS trunk. The code changes are to
>>> restore
>>> > post quilting regression tests at Zeus and WCOSS. No
>>> > impact for standard regression test package.
>>> >
>>> > A list of code changes are:
>>> > M src/atmos/post/post_nmm.f
>>> > M src/atmos/post/post_gfs.f
>>> > M src/conf/configure.nems.Zeus.intel
>>> > M job/exngac_fcst.sh.sms
>>> > M job/regression_tests/RT.sh_IN
>>> > M job/regression_tests/JNGAC_FORECAST.sms.para
>>> > M job/regression_tests/nmm_conf/nmm_reg_run.IN
>>> > M job/regression_tests/rt_gocart.sh
>>> > M job/regression_tests/Compile_wcoss.log
>>> > M job/regression_tests/ngac_bsub.IN
>>> > M job/regression_tests/rt_gfs.sh
>>> > M
>>> job/regression_tests/RegressionTests_wcoss.log
>>> > M job/regression_tests/gfs_fcst_run.IN_Linux
>>> > M job/regression_tests/ngac_qsub.IN
>>> > M job/regression_tests/gfs_fcst_run.IN_IBM
>>> > M job/exglobal_fcst.sh.sms_nems
>>> >
>>> > Please let me know if you have any questions or need
>>> > additional info.
>>> >
>>> > Thanks,
>>> > Sarah
>>> >
>>> >
>>> > On Wed, Aug 7, 2013 at 2:04 PM, Sarah Lu - NOAA
>>> > Affiliate <sarah.lu at noaa.gov
>>> <mailto:sarah.lu at noaa.gov> <mailto:sarah.lu at noaa.gov
>>> <mailto:sarah.lu at noaa.gov>>>
>>> > wrote:
>>> >
>>> >
>>> > After Gerhard's commit, I'll commit code
>>> changes to
>>> > restore post_quilting regression tests in NEMS.
>>> > (NEMS ticket #46 and GSM ticket #23)
>>> >
>>> > My proposed code changes can be found at:
>>> >
>>> https://svnemc.ncep.noaa.gov/projects/nems/branches/sarah/trunk_quilting
>>> > https://svnemc.ncep.noaa.gov/projects/gsm/branches/ticket_23
>>> >
>>> > The working copy at Zeus and Tide:
>>> >
>>> /scratch2/portfolios/NCEPDEV/global/save/Sarah.Lu/NEMS/trunk_quilting
>>> > /global/save/Sarah.Lu/NEMS/trunk_quilting
>>> >
>>> >
>>> > On Wed, Aug 7, 2013 at 12:23 PM, Gerhard Theurich
>>> > <theurich at sourcespring.net
>>> <mailto:theurich at sourcespring.net>
>>> > <mailto:theurich at sourcespring.net
>>> <mailto:theurich at sourcespring.net>>> wrote:
>>> >
>>> > Hi,
>>> >
>>> > This is a follow-up commit to the previous
>>> > commit I made to the NEMS
>>> > trunk on 08/02/13.
>>> >
>>> > (1) Now that the associated "gsm" changes are
>>> > merged onto the GSM trunk
>>> > (thank you Kate!), I would like to point the
>>> > "src/atmos/gsm" subdir to
>>> > the current revision of the GSM trunk.
>>> >
>>> > (2) A few house cleaning items:
>>> > - Remove deprecated subdirs
>>> "src/atmos/gfs" and
>>> > "src/ocean".
>>> > - Change use of "gfs" in favor of "gsm"
>>> in build
>>> > targets and ATM core
>>> > specification.
>>> >
>>> > (3) Add the file "nems.configure.IN
>>> <http://nems.configure.IN>
>>> > <http://nems.configure.IN>" that I had
>>> forgotten
>>> > to add in my
>>> > previous commit. This causes currently a
>>> warning
>>> > in the regular
>>> > regression testing (but no errors or bail
>>> outs).
>>> > However, the "nuopc
>>> > test" option does depend on this file.
>>> >
>>> > Code changes and test results are
>>> available on
>>> > Zeus under:
>>> >
>>> /home/Gerhard.Theurich/NEMS.trunk30446-working
>>> >
>>> > The modifications in detail:
>>> >
>>> > _M src/atmos
>>> > -> set svn:externals property to "gsm
>>> > -r30596
>>> > https://svnemc.ncep.noaa.gov/projects/gsm/trunk"
>>> > D src/atmos/gfs
>>> > -> remove deprecated "gfs" directory
>>> > M src/atmos/module_ATM_GRID_COMP.F90
>>> > -> support "gfs" and "gsm" as
>>> settings
>>> > for the ATM core/model
>>> > D src/ocean
>>> > -> remove deprecated "ocean"
>>> directory
>>> > M src/makefile
>>> > -> replace "gfs" with "gsm" in
>>> all build
>>> > targets
>>> > M job/regression_tests/RT.sh_IN
>>> > -> adjust to the build targets change
>>> > A
>>> job/regression_tests/nems.configure.IN <http://nems.configure.IN>
>>> > <http://nems.configure.IN>
>>> > -> added template file that is needed
>>> > for NUOPC mode and was
>>> > forgotten before
>>> > M
>>> job/regression_tests/RegressionTests_zeus.log
>>> > -> updated output file
>>> > M job/regression_tests/Compile_zeus.log
>>> > -> updated output file
>>> >
>>> > -Gerhard
>>> >
>>> _______________________________________________
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>>> >
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>>> >
>>> >
>>> >
>>> >
>>> >
>>> >
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>>> >
>>> >
>>> >
>>> >
>>> > --
>>> > Dr. Shrinivas Moorthi
>>> > Research Meteorologist
>>> > Global Climate and Weather Modeling Branch
>>> > Environmental Modeling Center / National Centers for
>>> Environmental
>>> > Prediction
>>> > 5830 University Research Court - (W/NP23), College Park MD
>>> 20740 USA
>>> > Tel: (301)683-3718 <tel:%28301%29683-3718>
>>> >
>>> > e-mail: Shrinivas.Moorthi at noaa.gov
>>> <mailto:Shrinivas.Moorthi at noaa.gov>
>>> <mailto:Shrinivas.Moorthi at noaa.gov <mailto:Shrinivas.Moorthi at noaa.gov>>
>>> > Phone: (301) 683-3718 <tel:%28301%29%20683-3718> Fax: (301)
>>> > 683-3718 <tel:%28301%29%20683-3718>
>>> >
>>> >
>>> >
>>> >
>>> > _______________________________________________
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>>> >
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