[Ncep.list.nems.announce] NEMS, NEMSLegacy and nmmb commits

Eugene Mirvis - NOAA Affiliate eugene.mirvis at noaa.gov
Fri Jun 24 12:52:25 UTC 2016


Dusan,

There are still several directories are having  permissions issues, for
instance:


Theia:/scratch4/NCEPDEV/meso/save/Dusan.Jovic/nmmb/nems_legacy/NEMS/src/atmos/nmm/conf>ls
-la
total 496
drwxr-sr-x 3 Dusan.Jovic meso  4096 Jun 23 14:03 .
drwxr-sr-x 6 Dusan.Jovic meso 32768 Jun 23 14:03 ..
-rw------- 1 Dusan.Jovic meso  1495 Jun 16 17:05 configure.nmmb.Linux.gnu
-rw------- 1 Dusan.Jovic meso  1501 Jun 16 17:05 configure.nmmb.Linux.intel
-rw------- 1 Dusan.Jovic meso  1266 Jun 16 17:05 configure.nmmb.Linux.pgi
-rw------- 1 Dusan.Jovic meso  2076 Jun 16 17:05 configure.nmmb.theia
-rw------- 1 Dusan.Jovic meso  2036 Jun 16 17:05 configure.nmmb.wcoss
-rw------- 1 Dusan.Jovic meso   483 Jun 16 17:05 make.rules
-rw------- 1 Dusan.Jovic meso   436 Jun 16 17:05 modules.nmmb.theia
-rw------- 1 Dusan.Jovic meso   438 Jun 16 17:05 modules.nmmb.wcoss



Theia:/scratch4/NCEPDEV/meso/save/Dusan.Jovic/nmmb/nems_legacy/NEMS/src/atmos/nmm/tests>ls
-la
total 1776
d-rw------- 1 Dusan.Jovic meso   210236 Jun 23 04:39
./nmm/tests/Compile_theia.log
-rw------- 1 Dusan.Jovic meso   113257 Jun 23 14:07
./nmm/tests/Compile_wcoss.log
-rwx------ 1 Dusan.Jovic meso     3627 Jun 16 17:49
./nmm/tests/default_vars.sh
-rwx------ 1 Dusan.Jovic meso     4642 Jun 16 17:49
./nmm/tests/detect_machine.sh
-rw------- 1 Dusan.Jovic meso     1264 Jun 16 17:49
./nmm/tests/filt_vars.txt
-rw------- 1 Dusan.Jovic meso    14126 Jun 16 17:49 ./nmm/tests/nests.txt
-rw------- 1 Dusan.Jovic meso      805 Jun 16 17:49
./nmm/tests/nmm_conf/nmm_bsub.IN
-rw------- 1 Dusan.Jovic meso      776 Jun 16 17:49
./nmm/tests/nmm_conf/nmm_bsub.IN_wcoss
-rw------- 1 Dusan.Jovic meso      674 Jun 16 17:49
./nmm/tests/nmm_conf/nmm_bsub.IN_yellowstone
-rw------- 1 Dusan.Jovic meso    15145 Jun 16 17:49
./nmm/tests/nmm_conf/nmm_fltr_conf_02
-rw------- 1 Dusan.Jovic meso    15149 Jun 16 17:49
./nmm/tests/nmm_conf/nmm_fltr_conf_03
-rw------- 1 Dusan.Jovic meso    15493 Jun 16 17:49
./nmm/tests/nmm_conf/nmm_fltr_conf.IN
-rw------- 1 Dusan.Jovic meso     1153 Jun 16 17:49
./nmm/tests/nmm_conf/nmm_fltr_run.IN
-rw------- 1 Dusan.Jovic meso    15149 Jun 16 17:49
./nmm/tests/nmm_conf/nmm_fltr_zombie_conf_03
-rw------- 1 Dusan.Jovic meso    15460 Jun 16 17:49
./nmm/tests/nmm_conf/nmm_fltr_zombie_conf.IN
-rw------- 1 Dusan.Jovic meso     1153 Jun 16 17:49
./nmm/tests/nmm_conf/nmm_fltr_zombie_run.IN
-rw------- 1 Dusan.Jovic meso    15408 Jun 16 17:49
./nmm/tests/nmm_conf/nmm_glob_conf.IN
-rw------- 1 Dusan.Jovic meso     1226 Jun 16 17:49
./nmm/tests/nmm_conf/nmm_glob_run.IN
-rw------- 1 Dusan.Jovic meso    17189 Jun 16 17:49
./nmm/tests/nmm_conf/nmm_mnests_2way_conf_02.IN
-rw------- 1 Dusan.Jovic meso    17022 Jun 16 17:49
./nmm/tests/nmm_conf/nmm_mnests_2way_conf_03.IN
-rw------- 1 Dusan.Jovic meso    17022 Jun 16 17:49
./nmm/tests/nmm_conf/nmm_mnests_2way_conf_04.IN
-rw------- 1 Dusan.Jovic meso    15488 Jun 16 17:49
./nmm/tests/nmm_conf/nmm_mnests_2way_conf.IN
-rw------- 1 Dusan.Jovic meso     1984 Jun 16 17:49
./nmm/tests/nmm_conf/nmm_mnests_2way_run.IN
-rw------- 1 Dusan.Jovic meso    16499 Jun 16 17:49
./nmm/tests/nmm_conf/nmm_mnests_conf_02.IN
-rw------- 1 Dusan.Jovic meso    16143 Jun 16 17:49
./nmm/tests/nmm_conf/nmm_mnests_conf_03.IN
-rw------- 1 Dusan.Jovic meso    16143 Jun 16 17:49
./nmm/tests/nmm_conf/nmm_mnests_conf_04.IN
-rw------- 1 Dusan.Jovic meso    15487 Jun 16 17:49
./nmm/tests/nmm_conf/nmm_mnests_conf.IN
-rw------- 1 Dusan.Jovic meso     1975 Jun 16 17:49
./nmm/tests/nmm_conf/nmm_mnests_run.IN
-rw------- 1 Dusan.Jovic meso      286 Jun 16 17:49
./nmm/tests/nmm_conf/nmm_msub.IN
-rw------- 1 Dusan.Jovic meso    15386 Jun 16 17:49
./nmm/tests/nmm_conf/nmm_nests_conf_02.IN
-rw------- 1 Dusan.Jovic meso    15386 Jun 16 17:49
./nmm/tests/nmm_conf/nmm_nests_conf_03.IN
-rw------- 1 Dusan.Jovic meso    15386 Jun 16 17:49
./nmm/tests/nmm_conf/nmm_nests_conf_04.IN
-rw------- 1 Dusan.Jovic meso    15509 Jun 16 17:49
./nmm/tests/nmm_conf/nmm_nests_conf.IN
-rw------- 1 Dusan.Jovic meso     1406 Jun 16 17:49
./nmm/tests/nmm_conf/nmm_nests_run.IN
-rw------- 1 Dusan.Jovic meso      490 Jun 16 17:49
./nmm/tests/nmm_conf/nmm_qsub.IN
-rw------- 1 Dusan.Jovic meso    15407 Jun 16 17:49
./nmm/tests/nmm_conf/nmm_reg_conf.IN
-rw------- 1 Dusan.Jovic meso     2246 Jun 16 17:49
./nmm/tests/nmm_conf/nmm_reg_run.IN
-r--r--r-- 1 Dusan.Jovic meso     1217 Jun 16 17:49
./nmm/tests/nmm_conf/.svn/entries
-rw------- 1 Dusan.Jovic meso   193051 Jun 23 05:08 ./nmm/tests/nohup.out
-rw------- 1 Dusan.Jovic meso    22763 Jun 23 05:08
./nmm/tests/RegressionTests_theia.log
-rw------- 1 Dusan.Jovic meso    21573 Jun 23 14:07
./nmm/tests/RegressionTests_wcoss.log
-rw------- 1 Dusan.Jovic meso     4020 Jun 16 17:49 ./nmm/tests/rt.conf
-rwx------ 1 Dusan.Jovic meso    17610 Jun 16 17:49 ./nmm/tests/rt_nmm.sh
-rwx------ 1 Dusan.Jovic meso     9038 Jun 16 18:17 ./nmm/tests/rt.sh
-rw------- 1 Dusan.Jovic meso    30114 Jun 16 17:49
./nmm/tests/solver_state.txt
-r--r--r-- 1 Dusan.Jovic meso      708 Jun 16 17:49 ./nmm/tests/.svn/entries
-r--r--r-- 1 Dusan.Jovic meso       30 Jun 16 17:49
./nmm/tests/.svn/props/default_vars.sh.svn-work
-r--r--r-- 1 Dusan.Jovic meso       30 Jun 16 17:49
./nmm/tests/.svn/props/detect_machine.sh.svn-work
-r--r--r-- 1 Dusan.Jovic meso       30 Jun 16 17:49
./nmm/tests/.svn/props/rt_nmm.sh.svn-work
-r--r--r-- 1 Dusan.Jovic meso       30 Jun 16 17:49
./nmm/tests/.svn/props/rt.sh.svn-work
-rw------- 1 Dusan.Jovic meso     1701 Jun 16 17:48
./nmm/tests/tests/nmm_2way_nests
-rw------- 1 Dusan.Jovic meso      836 Jun 16 17:48
./nmm/tests/tests/nmm_2way_nests_debug
-rw------- 1 Dusan.Jovic meso     1168 Jun 16 17:48
./nmm/tests/tests/nmm_2way_nests_restart
-rw------- 1 Dusan.Jovic meso      798 Jun 16 17:48
./nmm/tests/tests/nmm_cntrl
-rw------- 1 Dusan.Jovic meso      701 Jun 16 17:48
./nmm/tests/tests/nmm_decomp
-rw------- 1 Dusan.Jovic meso      754 Jun 16 17:48
./nmm/tests/tests/nmm_gfsp
-rw------- 1 Dusan.Jovic meso     1634 Jun 16 17:48
./nmm/tests/tests/nmm_mvg_nests
-rw------- 1 Dusan.Jovic meso     1834 Jun 16 17:48
./nmm/tests/tests/nmm_mvg_nests_gens
-rw------- 1 Dusan.Jovic meso     1233 Jun 16 17:48
./nmm/tests/tests/nmm_mvg_nests_restart
-rw------- 1 Dusan.Jovic meso      742 Jun 16 17:48
./nmm/tests/tests/nmm_nemsio
-rw------- 1 Dusan.Jovic meso     1070 Jun 16 17:48
./nmm/tests/tests/nmm_nest_rest
-rw------- 1 Dusan.Jovic meso     1697 Jun 16 17:48
./nmm/tests/tests/nmm_nests
-rw------- 1 Dusan.Jovic meso      916 Jun 16 17:48
./nmm/tests/tests/nmm_reg_ctl
-rw------- 1 Dusan.Jovic meso      524 Jun 16 17:48
./nmm/tests/tests/nmm_reg_ctl_debug
-rw------- 1 Dusan.Jovic meso      616 Jun 16 17:48
./nmm/tests/tests/nmm_reg_decomp
-rw------- 1 Dusan.Jovic meso      951 Jun 16 17:48
./nmm/tests/tests/nmm_reg_filt
-rw------- 1 Dusan.Jovic meso     1000 Jun 16 17:48
./nmm/tests/tests/nmm_reg_filt_zombie
-rw------- 1 Dusan.Jovic meso      700 Jun 16 17:48
./nmm/tests/tests/nmm_reg_gfsp
-rw------- 1 Dusan.Jovic meso      841 Jun 16 17:48
./nmm/tests/tests/nmm_reg_hur
-rw------- 1 Dusan.Jovic meso      638 Jun 16 17:48
./nmm/tests/tests/nmm_reg_nemsio
-rw------- 1 Dusan.Jovic meso      758 Jun 16 17:48
./nmm/tests/tests/nmm_reg_pcpadj
-rw------- 1 Dusan.Jovic meso      861 Jun 16 17:48
./nmm/tests/tests/nmm_reg_post
-rw------- 1 Dusan.Jovic meso      516 Jun 16 17:48
./nmm/tests/tests/nmm_reg_rst
-rw------- 1 Dusan.Jovic meso      505 Jun 16 17:48
./nmm/tests/tests/nmm_reg_rst_debug
-rw------- 1 Dusan.Jovic meso      541 Jun 16 17:48
./nmm/tests/tests/nmm_reg_rst_nio
-rw------- 1 Dusan.Jovic meso      532 Jun 16 17:48
./nmm/tests/tests/nmm_reg_rst_nio_debug
-rw------- 1 Dusan.Jovic meso      776 Jun 16 17:48
./nmm/tests/tests/nmm_reg_sas_zhao
-rw------- 1 Dusan.Jovic meso      801 Jun 16 17:48
./nmm/tests/tests/nmm_reg_sel_phy
-rw------- 1 Dusan.Jovic meso      764 Jun 16 17:48
./nmm/tests/tests/nmm_reg_spec_adv
-rw------- 1 Dusan.Jovic meso      617 Jun 16 17:48
./nmm/tests/tests/nmm_reg_spec_adv_rst
-rw------- 1 Dusan.Jovic meso      786 Jun 16 17:48
./nmm/tests/tests/nmm_reg_thomp
-rw------- 1 Dusan.Jovic meso      817 Jun 16 17:48
./nmm/tests/tests/nmm_reg_thread
-rw------- 1 Dusan.Jovic meso      565 Jun 16 17:48
./nmm/tests/tests/nmm_reg_timesr
-rw------- 1 Dusan.Jovic meso      798 Jun 16 17:48
./nmm/tests/tests/nmm_reg_wsm6_gfdl
-rw------- 1 Dusan.Jovic meso      798 Jun 16 17:48
./nmm/tests/tests/nmm_reg_wsm6_rrtm
-rw------- 1 Dusan.Jovic meso      514 Jun 16 17:48
./nmm/tests/tests/nmm_rest
-rw------- 1 Dusan.Jovic meso      539 Jun 16 17:48
./nmm/tests/tests/nmm_rest_nio
-rw------- 1 Dusan.Jovic meso      807 Jun 16 17:48
./nmm/tests/tests/nmm_thread
-r--r--r-- 1 Dusan.Jovic meso     1280 Jun 16 17:49
./nmm/tests/tests/.svn/entries
-rw------- 1 Dusan.Jovic meso       79 Jun 16 17:49
./nmm/tests/ts_locations.nml

& NEMS/tests
-rw------- 1 Dusan.Jovic meso 587819 Jun 23 01:31 nohup.out

Makes it hard to review or compile using nmm/conf, for instance.

-Eugene

On Thu, Jun 23, 2016 at 2:26 PM, Dusan Jovic <dusan.jovic at noaa.gov> wrote:

> Fixed.
>
> On 06/23/2016 02:01 PM, Eugene Mirvis wrote:
> > Dusan,
> >
> > There are no reading permission for a # of files in the directories
> > you've specifies.
> >
> > -Eugene
> >
> > On 6/23/2016 10:37 AM, Dusan Jovic wrote:
> >> Hi All,
> >>
> >>     I will be making updates to NEMS, NEMSLegacy and nmmb trunks.
> Changes
> >> are (mostly) related to making standalone nmmb model. NMMB specific
> >> physics modules have been moved from src/atmos/phys to the src/atmos/nmm
> >> directory. All physics modules are now located in a subdirectory
> >> nmm/nmmbphys (as we discussed on last UMIG meeting) and can be easily
> >> included in future physics project as external link.
> >>
> >> Code passed full regression tests on both machines and my working copies
> >> are:
> >>
> >> /meso/save/Dusan.Jovic/nmmb/nems_legacy
> >> /scratch4/NCEPDEV/meso/save/Dusan.Jovic/nmmb/nems_legacy
> >>
> >> I plan to make commit tomorrow.
> >>
> >> Dusan
> >>
> >> _______________________________________________
> >> Ncep.list.nems.announce mailing list
> >> Ncep.list.nems.announce at lstsrv.ncep.noaa.gov
> >>
> https://www.lstsrv.ncep.noaa.gov/mailman/listinfo/ncep.list.nems.announce
> >
> > _______________________________________________
> > Ncep.list.nems.announce mailing list
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> >
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>
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