<div dir="ltr"><div>Dusan,<br><br>There are still several directories are having permissions issues, for instance:<br><br><br>Theia:/scratch4/NCEPDEV/meso/save/Dusan.Jovic/nmmb/nems_legacy/NEMS/src/atmos/nmm/conf>ls -la<br>total 496<br>drwxr-sr-x 3 Dusan.Jovic meso 4096 Jun 23 14:03 .<br>drwxr-sr-x 6 Dusan.Jovic meso 32768 Jun 23 14:03 ..<br>-rw------- 1 Dusan.Jovic meso 1495 Jun 16 17:05 configure.nmmb.Linux.gnu<br>-rw------- 1 Dusan.Jovic meso 1501 Jun 16 17:05 configure.nmmb.Linux.intel<br>-rw------- 1 Dusan.Jovic meso 1266 Jun 16 17:05 configure.nmmb.Linux.pgi<br>-rw------- 1 Dusan.Jovic meso 2076 Jun 16 17:05 configure.nmmb.theia<br>-rw------- 1 Dusan.Jovic meso 2036 Jun 16 17:05 configure.nmmb.wcoss<br>-rw------- 1 Dusan.Jovic meso 483 Jun 16 17:05 make.rules<br>-rw------- 1 Dusan.Jovic meso 436 Jun 16 17:05 modules.nmmb.theia<br>-rw------- 1 Dusan.Jovic meso 438 Jun 16 17:05 modules.nmmb.wcoss<br><br><br><br>Theia:/scratch4/NCEPDEV/meso/save/Dusan.Jovic/nmmb/nems_legacy/NEMS/src/atmos/nmm/tests>ls -la<br>total 1776<br>d-rw------- 1 Dusan.Jovic meso 210236 Jun 23 04:39 ./nmm/tests/Compile_theia.log<br>-rw------- 1 Dusan.Jovic meso 113257 Jun 23 14:07 ./nmm/tests/Compile_wcoss.log<br>-rwx------ 1 Dusan.Jovic meso 3627 Jun 16 17:49 ./nmm/tests/default_vars.sh<br>-rwx------ 1 Dusan.Jovic meso 4642 Jun 16 17:49 ./nmm/tests/detect_machine.sh<br>-rw------- 1 Dusan.Jovic meso 1264 Jun 16 17:49 ./nmm/tests/filt_vars.txt<br>-rw------- 1 Dusan.Jovic meso 14126 Jun 16 17:49 ./nmm/tests/nests.txt<br>-rw------- 1 Dusan.Jovic meso 805 Jun 16 17:49 ./nmm/tests/nmm_conf/nmm_bsub.IN<br>-rw------- 1 Dusan.Jovic meso 776 Jun 16 17:49 ./nmm/tests/nmm_conf/nmm_bsub.IN_wcoss<br>-rw------- 1 Dusan.Jovic meso 674 Jun 16 17:49 ./nmm/tests/nmm_conf/nmm_bsub.IN_yellowstone<br>-rw------- 1 Dusan.Jovic meso 15145 Jun 16 17:49 ./nmm/tests/nmm_conf/nmm_fltr_conf_02<br>-rw------- 1 Dusan.Jovic meso 15149 Jun 16 17:49 ./nmm/tests/nmm_conf/nmm_fltr_conf_03<br>-rw------- 1 Dusan.Jovic meso 15493 Jun 16 17:49 ./nmm/tests/nmm_conf/nmm_fltr_conf.IN<br>-rw------- 1 Dusan.Jovic meso 1153 Jun 16 17:49 ./nmm/tests/nmm_conf/nmm_fltr_run.IN<br>-rw------- 1 Dusan.Jovic meso 15149 Jun 16 17:49 ./nmm/tests/nmm_conf/nmm_fltr_zombie_conf_03<br>-rw------- 1 Dusan.Jovic meso 15460 Jun 16 17:49 ./nmm/tests/nmm_conf/nmm_fltr_zombie_conf.IN<br>-rw------- 1 Dusan.Jovic meso 1153 Jun 16 17:49 ./nmm/tests/nmm_conf/nmm_fltr_zombie_run.IN<br>-rw------- 1 Dusan.Jovic meso 15408 Jun 16 17:49 ./nmm/tests/nmm_conf/nmm_glob_conf.IN<br>-rw------- 1 Dusan.Jovic meso 1226 Jun 16 17:49 ./nmm/tests/nmm_conf/nmm_glob_run.IN<br>-rw------- 1 Dusan.Jovic meso 17189 Jun 16 17:49 ./nmm/tests/nmm_conf/nmm_mnests_2way_conf_02.IN<br>-rw------- 1 Dusan.Jovic meso 17022 Jun 16 17:49 ./nmm/tests/nmm_conf/nmm_mnests_2way_conf_03.IN<br>-rw------- 1 Dusan.Jovic meso 17022 Jun 16 17:49 ./nmm/tests/nmm_conf/nmm_mnests_2way_conf_04.IN<br>-rw------- 1 Dusan.Jovic meso 15488 Jun 16 17:49 ./nmm/tests/nmm_conf/nmm_mnests_2way_conf.IN<br>-rw------- 1 Dusan.Jovic meso 1984 Jun 16 17:49 ./nmm/tests/nmm_conf/nmm_mnests_2way_run.IN<br>-rw------- 1 Dusan.Jovic meso 16499 Jun 16 17:49 ./nmm/tests/nmm_conf/nmm_mnests_conf_02.IN<br>-rw------- 1 Dusan.Jovic meso 16143 Jun 16 17:49 ./nmm/tests/nmm_conf/nmm_mnests_conf_03.IN<br>-rw------- 1 Dusan.Jovic meso 16143 Jun 16 17:49 ./nmm/tests/nmm_conf/nmm_mnests_conf_04.IN<br>-rw------- 1 Dusan.Jovic meso 15487 Jun 16 17:49 ./nmm/tests/nmm_conf/nmm_mnests_conf.IN<br>-rw------- 1 Dusan.Jovic meso 1975 Jun 16 17:49 ./nmm/tests/nmm_conf/nmm_mnests_run.IN<br>-rw------- 1 Dusan.Jovic meso 286 Jun 16 17:49 ./nmm/tests/nmm_conf/nmm_msub.IN<br>-rw------- 1 Dusan.Jovic meso 15386 Jun 16 17:49 ./nmm/tests/nmm_conf/nmm_nests_conf_02.IN<br>-rw------- 1 Dusan.Jovic meso 15386 Jun 16 17:49 ./nmm/tests/nmm_conf/nmm_nests_conf_03.IN<br>-rw------- 1 Dusan.Jovic meso 15386 Jun 16 17:49 ./nmm/tests/nmm_conf/nmm_nests_conf_04.IN<br>-rw------- 1 Dusan.Jovic meso 15509 Jun 16 17:49 ./nmm/tests/nmm_conf/nmm_nests_conf.IN<br>-rw------- 1 Dusan.Jovic meso 1406 Jun 16 17:49 ./nmm/tests/nmm_conf/nmm_nests_run.IN<br>-rw------- 1 Dusan.Jovic meso 490 Jun 16 17:49 ./nmm/tests/nmm_conf/nmm_qsub.IN<br>-rw------- 1 Dusan.Jovic meso 15407 Jun 16 17:49 ./nmm/tests/nmm_conf/nmm_reg_conf.IN<br>-rw------- 1 Dusan.Jovic meso 2246 Jun 16 17:49 ./nmm/tests/nmm_conf/nmm_reg_run.IN<br>-r--r--r-- 1 Dusan.Jovic meso 1217 Jun 16 17:49 ./nmm/tests/nmm_conf/.svn/entries<br>-rw------- 1 Dusan.Jovic meso 193051 Jun 23 05:08 ./nmm/tests/nohup.out<br>-rw------- 1 Dusan.Jovic meso 22763 Jun 23 05:08 ./nmm/tests/RegressionTests_theia.log<br>-rw------- 1 Dusan.Jovic meso 21573 Jun 23 14:07 ./nmm/tests/RegressionTests_wcoss.log<br>-rw------- 1 Dusan.Jovic meso 4020 Jun 16 17:49 ./nmm/tests/rt.conf<br>-rwx------ 1 Dusan.Jovic meso 17610 Jun 16 17:49 ./nmm/tests/rt_nmm.sh<br>-rwx------ 1 Dusan.Jovic meso 9038 Jun 16 18:17 ./nmm/tests/rt.sh<br>-rw------- 1 Dusan.Jovic meso 30114 Jun 16 17:49 ./nmm/tests/solver_state.txt<br>-r--r--r-- 1 Dusan.Jovic meso 708 Jun 16 17:49 ./nmm/tests/.svn/entries<br>-r--r--r-- 1 Dusan.Jovic meso 30 Jun 16 17:49 ./nmm/tests/.svn/props/default_vars.sh.svn-work<br>-r--r--r-- 1 Dusan.Jovic meso 30 Jun 16 17:49 ./nmm/tests/.svn/props/detect_machine.sh.svn-work<br>-r--r--r-- 1 Dusan.Jovic meso 30 Jun 16 17:49 ./nmm/tests/.svn/props/rt_nmm.sh.svn-work<br>-r--r--r-- 1 Dusan.Jovic meso 30 Jun 16 17:49 ./nmm/tests/.svn/props/rt.sh.svn-work<br>-rw------- 1 Dusan.Jovic meso 1701 Jun 16 17:48 ./nmm/tests/tests/nmm_2way_nests<br>-rw------- 1 Dusan.Jovic meso 836 Jun 16 17:48 ./nmm/tests/tests/nmm_2way_nests_debug<br>-rw------- 1 Dusan.Jovic meso 1168 Jun 16 17:48 ./nmm/tests/tests/nmm_2way_nests_restart<br>-rw------- 1 Dusan.Jovic meso 798 Jun 16 17:48 ./nmm/tests/tests/nmm_cntrl<br>-rw------- 1 Dusan.Jovic meso 701 Jun 16 17:48 ./nmm/tests/tests/nmm_decomp<br>-rw------- 1 Dusan.Jovic meso 754 Jun 16 17:48 ./nmm/tests/tests/nmm_gfsp<br>-rw------- 1 Dusan.Jovic meso 1634 Jun 16 17:48 ./nmm/tests/tests/nmm_mvg_nests<br>-rw------- 1 Dusan.Jovic meso 1834 Jun 16 17:48 ./nmm/tests/tests/nmm_mvg_nests_gens<br>-rw------- 1 Dusan.Jovic meso 1233 Jun 16 17:48 ./nmm/tests/tests/nmm_mvg_nests_restart<br>-rw------- 1 Dusan.Jovic meso 742 Jun 16 17:48 ./nmm/tests/tests/nmm_nemsio<br>-rw------- 1 Dusan.Jovic meso 1070 Jun 16 17:48 ./nmm/tests/tests/nmm_nest_rest<br>-rw------- 1 Dusan.Jovic meso 1697 Jun 16 17:48 ./nmm/tests/tests/nmm_nests<br>-rw------- 1 Dusan.Jovic meso 916 Jun 16 17:48 ./nmm/tests/tests/nmm_reg_ctl<br>-rw------- 1 Dusan.Jovic meso 524 Jun 16 17:48 ./nmm/tests/tests/nmm_reg_ctl_debug<br>-rw------- 1 Dusan.Jovic meso 616 Jun 16 17:48 ./nmm/tests/tests/nmm_reg_decomp<br>-rw------- 1 Dusan.Jovic meso 951 Jun 16 17:48 ./nmm/tests/tests/nmm_reg_filt<br>-rw------- 1 Dusan.Jovic meso 1000 Jun 16 17:48 ./nmm/tests/tests/nmm_reg_filt_zombie<br>-rw------- 1 Dusan.Jovic meso 700 Jun 16 17:48 ./nmm/tests/tests/nmm_reg_gfsp<br>-rw------- 1 Dusan.Jovic meso 841 Jun 16 17:48 ./nmm/tests/tests/nmm_reg_hur<br>-rw------- 1 Dusan.Jovic meso 638 Jun 16 17:48 ./nmm/tests/tests/nmm_reg_nemsio<br>-rw------- 1 Dusan.Jovic meso 758 Jun 16 17:48 ./nmm/tests/tests/nmm_reg_pcpadj<br>-rw------- 1 Dusan.Jovic meso 861 Jun 16 17:48 ./nmm/tests/tests/nmm_reg_post<br>-rw------- 1 Dusan.Jovic meso 516 Jun 16 17:48 ./nmm/tests/tests/nmm_reg_rst<br>-rw------- 1 Dusan.Jovic meso 505 Jun 16 17:48 ./nmm/tests/tests/nmm_reg_rst_debug<br>-rw------- 1 Dusan.Jovic meso 541 Jun 16 17:48 ./nmm/tests/tests/nmm_reg_rst_nio<br>-rw------- 1 Dusan.Jovic meso 532 Jun 16 17:48 ./nmm/tests/tests/nmm_reg_rst_nio_debug<br>-rw------- 1 Dusan.Jovic meso 776 Jun 16 17:48 ./nmm/tests/tests/nmm_reg_sas_zhao<br>-rw------- 1 Dusan.Jovic meso 801 Jun 16 17:48 ./nmm/tests/tests/nmm_reg_sel_phy<br>-rw------- 1 Dusan.Jovic meso 764 Jun 16 17:48 ./nmm/tests/tests/nmm_reg_spec_adv<br>-rw------- 1 Dusan.Jovic meso 617 Jun 16 17:48 ./nmm/tests/tests/nmm_reg_spec_adv_rst<br>-rw------- 1 Dusan.Jovic meso 786 Jun 16 17:48 ./nmm/tests/tests/nmm_reg_thomp<br>-rw------- 1 Dusan.Jovic meso 817 Jun 16 17:48 ./nmm/tests/tests/nmm_reg_thread<br>-rw------- 1 Dusan.Jovic meso 565 Jun 16 17:48 ./nmm/tests/tests/nmm_reg_timesr<br>-rw------- 1 Dusan.Jovic meso 798 Jun 16 17:48 ./nmm/tests/tests/nmm_reg_wsm6_gfdl<br>-rw------- 1 Dusan.Jovic meso 798 Jun 16 17:48 ./nmm/tests/tests/nmm_reg_wsm6_rrtm<br>-rw------- 1 Dusan.Jovic meso 514 Jun 16 17:48 ./nmm/tests/tests/nmm_rest<br>-rw------- 1 Dusan.Jovic meso 539 Jun 16 17:48 ./nmm/tests/tests/nmm_rest_nio<br>-rw------- 1 Dusan.Jovic meso 807 Jun 16 17:48 ./nmm/tests/tests/nmm_thread<br>-r--r--r-- 1 Dusan.Jovic meso 1280 Jun 16 17:49 ./nmm/tests/tests/.svn/entries<br>-rw------- 1 Dusan.Jovic meso 79 Jun 16 17:49 ./nmm/tests/ts_locations.nml<br><br></div>& NEMS/tests<br><div>-rw------- 1 Dusan.Jovic meso 587819 Jun 23 01:31 nohup.out<br></div><div class="gmail_extra"><br clear="all"><div><div class="gmail_signature" data-smartmail="gmail_signature"><div dir="ltr"><div><div dir="ltr"><div>Makes it hard to review or compile using nmm/conf, for instance.<br><br></div><div>-Eugene<br></div></div></div></div></div></div>
<br><div class="gmail_quote">On Thu, Jun 23, 2016 at 2:26 PM, Dusan Jovic <span dir="ltr"><<a href="mailto:dusan.jovic@noaa.gov" target="_blank">dusan.jovic@noaa.gov</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">Fixed.<br>
<br>
On 06/23/2016 02:01 PM, Eugene Mirvis wrote:<br>
> Dusan,<br>
><br>
> There are no reading permission for a # of files in the directories<br>
> you've specifies.<br>
><br>
> -Eugene<br>
><br>
> On 6/23/2016 10:37 AM, Dusan Jovic wrote:<br>
>> Hi All,<br>
>><br>
>> I will be making updates to NEMS, NEMSLegacy and nmmb trunks. Changes<br>
>> are (mostly) related to making standalone nmmb model. NMMB specific<br>
>> physics modules have been moved from src/atmos/phys to the src/atmos/nmm<br>
>> directory. All physics modules are now located in a subdirectory<br>
>> nmm/nmmbphys (as we discussed on last UMIG meeting) and can be easily<br>
>> included in future physics project as external link.<br>
>><br>
>> Code passed full regression tests on both machines and my working copies<br>
>> are:<br>
>><br>
>> /meso/save/Dusan.Jovic/nmmb/nems_legacy<br>
>> /scratch4/NCEPDEV/meso/save/Dusan.Jovic/nmmb/nems_legacy<br>
>><br>
>> I plan to make commit tomorrow.<br>
>><br>
>> Dusan<br>
>><br>
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</blockquote></div><br></div></div>