[Ncep.list.nems.announce] Follow-up commit to NEMS trunk for ticket #41 NUOPC/OCN integration

Nicole McKee - NOAA Affiliate nicole.mckee at noaa.gov
Fri Aug 30 12:46:51 UTC 2013


I am also having problems just running RT.sh_IN straight out of the trunk
on Zeus.

Nicole



Nicole McKee
IMSG/NCEP-EMC Global Modeling Branch
301-683-3812


On Fri, Aug 30, 2013 at 8:32 AM, Shrinivas Moorthi <
shrinivas.moorthi at noaa.gov> wrote:

> All,
>     I am trying to compile NEMS on zeus and I am getting errors (I guess
> for ESMF library)
>
> "ifort -lmpi -openmp -convert big_endian -assume byterecl
> -mkl=sequential "-g -check all -ftrapuv -stack-check -fstack-protector
> -heap-arrays -recursive" -I/contrib/nceplibs/nwprod/lib/incmod/nemsio
> -fp-model strict  -c module_ERR_MSG.f90
> ifort: command line warning #10156: ignoring option '-g'; no argument
> required
> module_ERR_MSG.f90(61): error #7002: Error in opening the compiled
> module file.  Check INCLUDE paths.   [ESMF_MOD]"
>
> What am I missing?
> Thanks
> Moorthi
> On 08/23/2013 12:55 PM, Gerhard Theurich wrote:
> > Hi Nicole,
> >
> > Yes, the change was made consistently across _all_ build targets. You
> > can see them all by just typing "make" (without specifying a target).
> > This will print out the help message that shows the available targets.
> >
> > -Gerhard
> >
> > On 08/23/2013 09:48 AM, Nicole McKee - NOAA Affiliate wrote:
> >> Would the 'gsm' part also be used for other compilations, as well? Like
> >> 'gmake nmm_gsm', for example?
> >>
> >>
> >>
> >> Nicole McKee
> >> IMSG/NCEP-EMC Global Modeling Branch
> >> 301-683-3812
> >>
> >>
> >> On Wed, Aug 14, 2013 at 9:53 AM, Gerhard Theurich
> >> <theurich at sourcespring.net <mailto:theurich at sourcespring.net>> wrote:
> >>
> >>      That is correct, in my last commit I was trying to more
> consistently
> >>      move to using "gsm" instead of "gfs". One thing was to replace
> "gfs"
> >>      with "gsm" in all of the NEMS build targets. Another was that the
> old
> >>      "gfs" sub-directory was removed.
> >>      -Gerhard
> >>
> >>      On 08/14/2013 06:29 AM, Sarah Lu - NOAA Affiliate wrote:
> >>       >
> >>       > Gerhard changed it to 'gmake gsm'.
> >>       >
> >>       >
> >>       > On Wed, Aug 14, 2013 at 9:22 AM, Shrinivas Moorthi - NOAA
> Federal
> >>       > <shrinivas.moorthi at noaa.gov <mailto:shrinivas.moorthi at noaa.gov>
> >>      <mailto:shrinivas.moorthi at noaa.gov
> >>      <mailto:shrinivas.moorthi at noaa.gov>>> wrote:
> >>       >
> >>       >     I haven't touched NEMS for a while and now I try to compile
> >>      ans it
> >>       >     does not work.
> >>       >     I get
> >>       >     "gmake gfs GOCART_MODE=full
> >>       >     gmake: *** No rule to make target `gfs'.  Stop."
> >>       >
> >>       >     What am I doing wrong?
> >>       >     Thanks
> >>       >     Moorthi
> >>       >
> >>       >
> >>       >
> >>       >     On Fri, Aug 9, 2013 at 7:17 PM, Sarah Lu - NOAA Affiliate
> >>       >     <sarah.lu at noaa.gov <mailto:sarah.lu at noaa.gov>
> >>      <mailto:sarah.lu at noaa.gov <mailto:sarah.lu at noaa.gov>>> wrote:
> >>       >
> >>       >
> >>       >         Thanks to Gerhard,  the NEMS trunk has been pointed to
> GSM at
> >>       >         R30692.   The two trunk are in sync.
> >>       >
> >>       >         Have a nice weekend to you all,
> >>       >         Sarah
> >>       >
> >>       >
> >>       >         On Fri, Aug 9, 2013 at 6:30 PM, Sarah Lu - NOAA
> Affiliate
> >>       >         <sarah.lu at noaa.gov <mailto:sarah.lu at noaa.gov>
> >>      <mailto:sarah.lu at noaa.gov <mailto:sarah.lu at noaa.gov>>> wrote:
> >>       >
> >>       >             Dear all --
> >>       >
> >>       >             Both GSM and NEMS trunks have been updated (R30692
> >>      for GSM
> >>       >             and R30711 for NEMS).
> >>       >
> >>       >             However, I notice the NEMS's external link is
> pointed
> >>      to GSM
> >>       >             trunk at R30596.   Could someone please help me to
> >>      sync the
> >>       >             code so the NEMS trunk can point to the tip of GSM
> trunk.
> >>       >
> >>       >             Thanks,
> >>       >             Sarah
> >>       >
> >>       >
> >>       >             On Fri, Aug 9, 2013 at 1:13 PM, Sarah Lu - NOAA
> Affiliate
> >>       >             <sarah.lu at noaa.gov <mailto:sarah.lu at noaa.gov>
> >>      <mailto:sarah.lu at noaa.gov <mailto:sarah.lu at noaa.gov>>> wrote:
> >>       >
> >>       >                 Dear All --
> >>       >
> >>       >                 Kate will update GSM trunk this afternoon, and
> >>      I'll then
> >>       >                 update the NEMS trunk.   The code changes are to
> >>      restore
> >>       >                 post quilting regression tests at Zeus and
> WCOSS.  No
> >>       >                 impact for standard regression test package.
> >>       >
> >>       >                 A list of code changes are:
> >>       >                 M       src/atmos/post/post_nmm.f
> >>       >                 M       src/atmos/post/post_gfs.f
> >>       >                 M       src/conf/configure.nems.Zeus.intel
> >>       >                 M       job/exngac_fcst.sh.sms
> >>       >                 M       job/regression_tests/RT.sh_IN
> >>       >                 M
> job/regression_tests/JNGAC_FORECAST.sms.para
> >>       >                 M
> job/regression_tests/nmm_conf/nmm_reg_run.IN
> >>       >                 M       job/regression_tests/rt_gocart.sh
> >>       >                 M       job/regression_tests/Compile_wcoss.log
> >>       >                 M       job/regression_tests/ngac_bsub.IN
> >>       >                 M       job/regression_tests/rt_gfs.sh
> >>       >                 M
> >>      job/regression_tests/RegressionTests_wcoss.log
> >>       >                 M
> job/regression_tests/gfs_fcst_run.IN_Linux
> >>       >                 M       job/regression_tests/ngac_qsub.IN
> >>       >                 M       job/regression_tests/gfs_fcst_run.IN_IBM
> >>       >                 M       job/exglobal_fcst.sh.sms_nems
> >>       >
> >>       >                 Please let me know if you have any questions or
> need
> >>       >                 additional info.
> >>       >
> >>       >                 Thanks,
> >>       >                 Sarah
> >>       >
> >>       >
> >>       >                 On Wed, Aug 7, 2013 at 2:04 PM, Sarah Lu - NOAA
> >>       >                 Affiliate <sarah.lu at noaa.gov
> >>      <mailto:sarah.lu at noaa.gov> <mailto:sarah.lu at noaa.gov
> >>      <mailto:sarah.lu at noaa.gov>>>
> >>       >                 wrote:
> >>       >
> >>       >
> >>       >                     After Gerhard's commit, I'll commit code
> >>      changes to
> >>       >                     restore post_quilting regression tests in
> NEMS.
> >>       >                     (NEMS ticket #46 and GSM ticket #23)
> >>       >
> >>       >                     My proposed code changes can be found at:
> >>       >
> >>
> https://svnemc.ncep.noaa.gov/projects/nems/branches/sarah/trunk_quilting
> >>       > https://svnemc.ncep.noaa.gov/projects/gsm/branches/ticket_23
> >>       >
> >>       >                     The working copy at Zeus and Tide:
> >>       >
> >>
>  /scratch2/portfolios/NCEPDEV/global/save/Sarah.Lu/NEMS/trunk_quilting
> >>       >                     /global/save/Sarah.Lu/NEMS/trunk_quilting
> >>       >
> >>       >
> >>       >                     On Wed, Aug 7, 2013 at 12:23 PM, Gerhard
> Theurich
> >>       >                     <theurich at sourcespring.net
> >>      <mailto:theurich at sourcespring.net>
> >>       >                     <mailto:theurich at sourcespring.net
> >>      <mailto:theurich at sourcespring.net>>> wrote:
> >>       >
> >>       >                         Hi,
> >>       >
> >>       >                         This is a follow-up commit to the
> previous
> >>       >                         commit I made to the NEMS
> >>       >                         trunk on 08/02/13.
> >>       >
> >>       >                         (1) Now that the associated "gsm"
> changes are
> >>       >                         merged onto the GSM trunk
> >>       >                         (thank you Kate!), I would like to
> point the
> >>       >                         "src/atmos/gsm" subdir to
> >>       >                         the current revision of the GSM trunk.
> >>       >
> >>       >                         (2) A few house cleaning items:
> >>       >                         - Remove deprecated subdirs
> >>      "src/atmos/gfs" and
> >>       >                         "src/ocean".
> >>       >                         - Change use of "gfs" in favor of "gsm"
> >>      in build
> >>       >                         targets and ATM core
> >>       >                         specification.
> >>       >
> >>       >                         (3) Add the file "nems.configure.IN
> >>      <http://nems.configure.IN>
> >>       >                         <http://nems.configure.IN>" that I had
> >>      forgotten
> >>       >                         to add in my
> >>       >                         previous commit. This causes currently a
> >>      warning
> >>       >                         in the regular
> >>       >                         regression testing (but no errors or
> bail
> >>      outs).
> >>       >                         However, the "nuopc
> >>       >                         test" option does depend on this file.
> >>       >
> >>       >                         Code changes and test results are
> >>      available on
> >>       >                         Zeus under:
> >>       >
> >>      /home/Gerhard.Theurich/NEMS.trunk30446-working
> >>       >
> >>       >                         The modifications in detail:
> >>       >
> >>       >                         _M   src/atmos
> >>       >                                 -> set svn:externals property
> to "gsm
> >>       >                         -r30596
> >>       > https://svnemc.ncep.noaa.gov/projects/gsm/trunk"
> >>       >                         D    src/atmos/gfs
> >>       >                                 -> remove deprecated "gfs"
> directory
> >>       >                         M    src/atmos/module_ATM_GRID_COMP.F90
> >>       >                                 -> support "gfs" and "gsm" as
> >>      settings
> >>       >                         for the ATM core/model
> >>       >                         D    src/ocean
> >>       >                                 -> remove deprecated "ocean"
> >>      directory
> >>       >                         M    src/makefile
> >>       >                                 -> replace "gfs" with "gsm" in
> >>      all build
> >>       >                         targets
> >>       >                         M    job/regression_tests/RT.sh_IN
> >>       >                                 -> adjust to the build targets
> change
> >>       >                         A
> >>        job/regression_tests/nems.configure.IN <http://nems.configure.IN
> >
> >>       >                         <http://nems.configure.IN>
> >>       >                                 -> added template file that is
> needed
> >>       >                         for NUOPC mode and was
> >>       >                         forgotten before
> >>       >                         M
> >>        job/regression_tests/RegressionTests_zeus.log
> >>       >                                 -> updated output file
> >>       >                         M
>  job/regression_tests/Compile_zeus.log
> >>       >                                 -> updated output file
> >>       >
> >>       >                         -Gerhard
> >>       >
> >>      _______________________________________________
> >>       >                         Ncep.list.nems.announce mailing list
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> >>      <mailto:Ncep.list.nems.announce at lstsrv.ncep.noaa.gov>
> >>       >
> >>      <mailto:Ncep.list.nems.announce at lstsrv.ncep.noaa.gov
> >>      <mailto:Ncep.list.nems.announce at lstsrv.ncep.noaa.gov>>
> >>       >
> https://lstsrv.ncep.noaa.gov/mailman/listinfo/ncep.list.nems.announce
> >>       >
> >>       >
> >>       >
> >>       >
> >>       >
> >>       >
> >>       >         _______________________________________________
> >>       >         Ncep.list.nems.announce mailing list
> >>       > Ncep.list.nems.announce at lstsrv.ncep.noaa.gov
> >>      <mailto:Ncep.list.nems.announce at lstsrv.ncep.noaa.gov>
> >>       >         <mailto:Ncep.list.nems.announce at lstsrv.ncep.noaa.gov
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> >>       >
> https://lstsrv.ncep.noaa.gov/mailman/listinfo/ncep.list.nems.announce
> >>       >
> >>       >
> >>       >
> >>       >
> >>       >     --
> >>       >     Dr. Shrinivas Moorthi
> >>       >     Research Meteorologist
> >>       >     Global Climate and Weather Modeling Branch
> >>       >     Environmental Modeling Center / National Centers for
> >>      Environmental
> >>       >     Prediction
> >>       >     5830 University Research Court - (W/NP23), College Park MD
> >>      20740 USA
> >>       >     Tel: (301)683-3718 <tel:%28301%29683-3718>
> >>       >
> >>       >     e-mail: Shrinivas.Moorthi at noaa.gov
> >>      <mailto:Shrinivas.Moorthi at noaa.gov>
> >>      <mailto:Shrinivas.Moorthi at noaa.gov <mailto:
> Shrinivas.Moorthi at noaa.gov>>
> >>       >     Phone: (301) 683-3718 <tel:%28301%29%20683-3718>   Fax:
> (301)
> >>       >     683-3718 <tel:%28301%29%20683-3718>
> >>       >
> >>       >
> >>       >
> >>       >
> >>       > _______________________________________________
> >>       > Ncep.list.nems.announce mailing list
> >>       > Ncep.list.nems.announce at lstsrv.ncep.noaa.gov
> >>      <mailto:Ncep.list.nems.announce at lstsrv.ncep.noaa.gov>
> >>       >
> https://lstsrv.ncep.noaa.gov/mailman/listinfo/ncep.list.nems.announce
> >>       >
> >>      _______________________________________________
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> >>
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> >>
> >>
> > _______________________________________________
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>
> --
> Dr. Shrinivas Moorthi
> Research Meteorologist
> Global Climate and Weather Modeling Branch
> Environmental Modeling Center / National Centers for Environmental
> Prediction
> 5830 University Research Court - (W/NP23), College Park MD 20740 USA
> Tel:(301)683-3718
>
> _______________________________________________
> Ncep.list.nems.announce mailing list
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