[Ncep.list.emc.fv3gfs_tickets] FV3GFS Ticket #15: FV3 May 15 Release

Tue May 9 16:54:42 UTC 2017

Does anyone know what might cause the following error right off the bat?
"FATAL from PE    92: mpp_sync_self: size_recv does not match of data 
received

Rank 145 [Tue May  9 16:38:33 2017] [c7-0c2s6n0] Fatal error in 
PMPI_Wait: Message truncated, error stack:
PMPI_Wait(186)...................: MPI_Wait(request=0xbf3e7c4, 
status=0xb30ac68) failed
MPIR_Wait_impl(79)...............:
MPID_nem_gni_lmt_start_recv(1580): Message from rank 89 and tag 2 
truncated; 33528 bytes received but buffer size is 5880"
Thanks
Moorthi
On 05/09/2017 11:48 AM, Dusan Jovic wrote:
> Jun,
>
> Here's what I get when I try to checkout that branch:
>
> slogin2:/gpfs/hps/emc/meso/save/Dusan.Jovic/FV3> *svn co 
> https://svnemc.ncep.noaa.gov/projects/nems/apps/NEMSfv3gfs/branches/fv3.v0release*
>
> A    fv3.v0release/parm
> A    fv3.v0release/parm/model_configure.IN
>
> . . . .
>
> A    fv3.v0release/compsets/fv3.input
> A    fv3.v0release/standaloneFV3.appBuilder
>  U   fv3.v0release
>
> Fetching external item into '*fv3.v0release/NEMS*':
> A    fv3.v0release/NEMS/exe
> A    fv3.v0release/NEMS/exe/mkDepends.pl
>
>  . . . .
>
> A    fv3.v0release/NEMS/NEMSAppBuilder
> A    fv3.v0release/NEMS/OldCompsetRun
>  U   fv3.v0release/NEMS
>
> Fetching external item into '*fv3.v0release/NEMS/tests/produti*l':
> A    fv3.v0release/NEMS/tests/produtil/ush
> A    fv3.v0release/NEMS/tests/produtil/ush/testgen.py
> . . . .
>
> A    fv3.v0release/NEMS/tests/produtil/ush/forcetest.py
> A    fv3.v0release/NEMS/tests/produtil/ush/testme.py
> Checked out external at revision 90581.
>
> Checked out revision 90943.
> svn: warning: W200000: Error handling externals definition for 
> '*fv3.v0release/FV3*':
> svn: warning: W175013: Unable to connect to a repository at URL 
> '*https://svnemc.ncep.noaa.gov/projects/fv3/trunk*'
> Checked out revision 92536.
>
> Again, is this somehow related to last week's problems with the svn 
> server?
>
> Dusan
>
>
> On 05/09/2017 11:22 AM, Jun Wang - NOAA Affiliate wrote:
>> Dusan,
>>
>> Thanks for looking at the release readme file! The readme file is 
>> prepared for the targeted release, which is a final nemsfv3gfs tag, 
>> currently it does not exist yet. Please check out the current branch 
>> instead:
>>
>> *https://svnemc.ncep.noaa.gov/projects/nems/apps/NEMSfv3gfs/branches/fv3.v0release 
>> <https://svnemc.ncep.noaa.gov/projects/nems/apps/NEMSfv3gfs/branches/fv3.v0release/release/v0/readme.txt>
>>
>> *
>> then following the readme file to see if you can run the code on 
>> theia and wcoss, please let me know if you find any mistakes/errors. 
>> Thank you very much for the first person for beta testing!
>>
>>
>> Jun*
>> *
>>
>> On Tue, May 9, 2017 at 11:10 AM, Dusan Jovic <dusan.jovic at noaa.gov 
>> <mailto:dusan.jovic at noaa.gov>> wrote:
>>
>>     Is this readme.txt file the latest version available?
>>
>>     *https://svnemc.ncep.noaa.gov/projects/nems/apps/NEMSfv3gfs/branches/fv3.v0release/release/v0/readme.txt
>>     <https://svnemc.ncep.noaa.gov/projects/nems/apps/NEMSfv3gfs/branches/fv3.v0release/release/v0/readme.txt>**
>>     *
>>     If it is then the URL of the v0 repository is either wrong or I
>>     am not allowed to check it out (is this related to recent issues
>>     with our svn server?)
>>
>>     1.  check out release version at:
>>            https://svnemc.ncep.noaa.gov/projects/nems/apps/NEMSfv3gfs/tags/fv3_release.v0
>>     <https://svnemc.ncep.noaa.gov/projects/nems/apps/NEMSfv3gfs/tags/fv3_release.v0>,
>>
>>          %svn cohttps://svnemc.ncep.noaa.gov/projects/nems/apps/NEMSfv3gfs/tags/fv3_release.v0
>>     <https://svnemc.ncep.noaa.gov/projects/nems/apps/NEMSfv3gfs/tags/fv3_release.v0>
>>          %cd fv3_release.v0
>>
>>
>>     svn cohttps://svnemc.ncep.noaa.gov/projects/nems/apps/NEMSfv3gfs/tags/fv3_release.v0
>>     <https://svnemc.ncep.noaa.gov/projects/nems/apps/NEMSfv3gfs/tags/fv3_release.v0>
>>     svn: E170000: URL 'https://svnemc.ncep.noaa.gov/projects/nems/apps/NEMSfv3gfs/tags/fv3_release.v0
>>     <https://svnemc.ncep.noaa.gov/projects/nems/apps/NEMSfv3gfs/tags/fv3_release.v0>' doesn't exist
>>
>>     Dusan
>>     On 05/03/2017 03:45 PM, FV3GFS Trac Ticket wrote:
>>>     #15: FV3 May 15 Release
>>>     ------------------------------+------------------------
>>>        Reporter:  samuel.trahan@…  |      Owner:  somebody
>>>            Type:  task             |     Status:  new
>>>        Priority:  critical         |  Milestone:  milestone1
>>>       Component:  component1       |    Version:
>>>     Resolution:                   |   Keywords:  release
>>>     ------------------------------+------------------------
>>>
>>>     Comment (by jun.wang@…):
>>>
>>>       Following Vijay's suggestion, a nemsfv3 branch is created at:
>>>
>>>       *https://svnemc.ncep.noaa.gov/projects/nems/apps/NEMSfv3gfs/branches/fv3.v0release
>>>     <https://svnemc.ncep.noaa.gov/projects/nems/apps/NEMSfv3gfs/branches/fv3.v0release>*
>>>
>>>       This branch will contain required script and instruction to run the test
>>>       cases Fanglin set up.
>>>
>>>       A new directory release/v0 is added under fv3.v0release, following files
>>>       are copied from Fanglin's fv3gfs branch: FV3GFS_V0_RELEASE:
>>>
>>>       exec  exp  modulefiles  parm  readme.txt  scripts  sorc  ush
>>>
>>>       where:
>>>       exec: hold fregrid executables
>>>       exp: contains build.sh and runjob_cray.sh, runjob_theia.sh, run script to
>>>       start the experiment
>>>       modulefiles : contain fregrid model files
>>>       readme.txt: instructions on running release cases
>>>       scripts: exglobal_fcst_nemsfv3gfs.sh forecast scripts to set up
>>>       namelist,etc.
>>>       sorc: contain fregrid source code
>>>       ush: utility script to run remapping
>>>
>>>       A new script runjob_theia.sh is created and run the test cases on theia.
>>>
>>>     --
>>>     Ticket URL:<https://svnemc.ncep.noaa.gov/trac/fv3gfs/ticket/15#comment:2>
>>>     <https://svnemc.ncep.noaa.gov/trac/fv3gfs/ticket/15#comment:2>
>>>     fv3gfs<https://svnemc.ncep.noaa.gov/trac/fv3gfs>
>>>     <https://svnemc.ncep.noaa.gov/trac/fv3gfs>
>>>     NGGPS FV3GFS Development
>>
-- 
Dr. Shrinivas Moorthi
Research Meteorologist
Global Climate and Weather Modeling Branch
Environmental Modeling Center / National Centers for Environmental Prediction
5830 University Research Court - (W/NP23), College Park MD 20740 USA
Tel:(301)683-3718
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