<div dir="ltr">I am working with the latest trunk version now, and from now on. Any changes you want to add to the trunk, I can get from there directly.<div><br></div></div><div class="gmail_extra"><br clear="all"><div><div class="gmail_signature" data-smartmail="gmail_signature"><div dir="ltr"><div><div dir="ltr">Houjun Wang</div></div></div></div></div>
<br><div class="gmail_quote">On Thu, Jul 27, 2017 at 11:19 AM, Naomi Maruyama - NOAA Affiliate <span dir="ltr"><<a href="mailto:naomi.maruyama@noaa.gov" target="_blank">naomi.maruyama@noaa.gov</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div dir="ltr">Rashid and Houjun,<div><br></div><div>yes, I can suggest how to change the IPE code in order to stop the run immediately when a flux tube fails first.</div><div><br></div><div>Houjun: </div><div>could you please commit your IPE branch to our IPE so that I can easily search for the differences between your IPE version vs. the IPE master in the IPE repository on github (please also the instruction on how to work with WAM-IPE branch:<a href="https://docs.google.com/a/noaa.gov/document/d/1iGSijW5c-y4YW29bXhZhO0SzXUz3Ywjz0e1r-xHI7hk/edit?usp=sharing" target="_blank">https://docs.google.<wbr>com/a/noaa.gov/document/d/<wbr>1iGSijW5c-<wbr>y4YW29bXhZhO0SzXUz3Ywjz0e1r-<wbr>xHI7hk/edit?usp=sharing</a>). I am going to send you an invitation as a collaborator from github.</div><div><br></div><div>Thanks.</div><span class="HOEnZb"><font color="#888888"><div>naomi </div></font></span></div><div class="HOEnZb"><div class="h5"><div class="gmail_extra"><br><div class="gmail_quote">On Tue, Jul 25, 2017 at 5:32 PM, Rashid Akmaev - NOAA Federal <span dir="ltr"><<a href="mailto:rashid.akmaev@noaa.gov" target="_blank">rashid.akmaev@noaa.gov</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div dir="auto"><div>Is it possible to catch when a tube first fails? Does the restart from MSIS Houjun uses make them fail? Plotting composition after the fact probably may not help much as failed tubes will most likely stay that way no matter what the composition, right?<span class="m_5497443022798293325HOEnZb"><font color="#888888"><br><br>Rashid Akmaev</font></span></div><div><div class="m_5497443022798293325h5"><div><br>On Jul 25, 2017, at 4:25 PM, Naomi Maruyama - NOAA Affiliate <<a href="mailto:naomi.maruyama@noaa.gov" target="_blank">naomi.maruyama@noaa.gov</a>> wrote:<br><br></div><blockquote type="cite"><div><div dir="ltr">Hi Houjun,<div><br></div><div>Thanks for your showing some updates at our meeting. Your results look very encouraging. But could you please also plot the WAM fields from your runs in order to confirm that the WAM fields that are used in IPE are reasonable? </div><div><br></div><div>In your plotting script, set the VarType to 4 (instead of 7 for NmF2) if you want to plot WAM neutral atomic Oxygen, for example. Also you could change the altitude of your plot by changing the line, "setenv alt" inside the visualization script.</div><div><br></div><div>Thanks.</div><div>naomi</div><div><br></div><div><br></div><div><br></div><div><br></div><div><br></div></div><div class="gmail_extra"><br><div class="gmail_quote">On Tue, Jul 25, 2017 at 2:29 PM, Naomi Maruyama - NOAA Affiliate <span dir="ltr"><<a href="mailto:naomi.maruyama@noaa.gov" target="_blank">naomi.maruyama@noaa.gov</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div dir="ltr">Thanks.<div><br></div><div>I see that failed flux tubes in your plots and FLIP_ERR in your runs. But I cannot suggest anything to solve the problem until I can make some test runs.</div><div><br></div><div>In order to solve this issue, I would need to reproduce your run by myself, and try to debug the run. Could you please suggest how I can do that?</div><div><br></div><div>Thanks.</div><span class="m_5497443022798293325m_5352177521349815449HOEnZb"><font color="#888888"><div>naomi </div></font></span></div><div class="m_5497443022798293325m_5352177521349815449HOEnZb"><div class="m_5497443022798293325m_5352177521349815449h5"><div class="gmail_extra"><br><div class="gmail_quote">On Tue, Jul 25, 2017 at 10:30 AM, Houjun Wang - NOAA Affiliate <span dir="ltr"><<a href="mailto:houjun.wang@noaa.gov" target="_blank">houjun.wang@noaa.gov</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div dir="ltr">yes</div><div class="gmail_extra"><span class="m_5497443022798293325m_5352177521349815449m_-664132412513045576HOEnZb"><font color="#888888"><br clear="all"><div><div class="m_5497443022798293325m_5352177521349815449m_-664132412513045576m_5252770544937976852gmail_signature" data-smartmail="gmail_signature"><div dir="ltr"><div><div dir="ltr">Houjun Wang</div></div></div></div></div></font></span><div><div class="m_5497443022798293325m_5352177521349815449m_-664132412513045576h5">
<br><div class="gmail_quote">On Tue, Jul 25, 2017 at 10:25 AM, Naomi Maruyama - NOAA Affiliate <span dir="ltr"><<a href="mailto:naomi.maruyama@noaa.gov" target="_blank">naomi.maruyama@noaa.gov</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div dir="ltr">Houjun<div><br></div><div>Thank you very much for archiving the files. I am going to study them.</div><span><div><br></div><div><br></div><div><br></div><div>>><span style="font-size:12.8px">I have saved the entire rundir for two runs in:</span></div><div style="font-size:12.8px"><br></div><div style="font-size:12.8px"><span style="font-size:12.8px">/scratch3/NCEPDEV/swpc/</span><span style="font-size:12.8px">noscrub<wbr>/swpc.spacepara/</span><span style="font-size:12.8px">archive/</span><span style="font-variant-ligatures:no-common-ligatures;color:rgb(0,0,0);font-family:Menlo;font-size:11px">wam201<wbr>7071606gdasfcst1</span><br></div><div style="font-size:12.8px"><span style="font-size:12.8px">/scratch3/NCEPDEV/swpc/</span><span style="font-size:12.8px">noscrub<wbr>/swpc.spacepara/</span><span style="font-size:12.8px">archive/</span><span style="font-variant-ligatures:no-common-ligatures;color:rgb(0,0,0);font-family:Menlo;font-size:11px">wam201<wbr>7071612gdasfcst1</span></div><div style="font-size:12.8px"><span style="font-variant-ligatures:no-common-ligatures;color:rgb(0,0,0);font-family:Menlo;font-size:11px"><br></span></div></span><div><font color="#000000" face="Menlo"><span style="font-size:11px;font-variant-ligatures:no-common-ligatures">you mentioned at the previous meeting that IPE is slowing down with failed flux tubes. Are these two runs have the problem?</span></font></div><div><font color="#000000" face="Menlo"><span style="font-size:11px;font-variant-ligatures:no-common-ligatures"><br></span></font></div><div><font color="#000000" face="Menlo"><span style="font-size:11px;font-variant-ligatures:no-common-ligatures">Thanks.</span></font></div><span class="m_5497443022798293325m_5352177521349815449m_-664132412513045576m_5252770544937976852HOEnZb"><font color="#888888"><div><font color="#000000" face="Menlo"><span style="font-size:11px;font-variant-ligatures:no-common-ligatures">naomi</span></font></div></font></span></div><div class="m_5497443022798293325m_5352177521349815449m_-664132412513045576m_5252770544937976852HOEnZb"><div class="m_5497443022798293325m_5352177521349815449m_-664132412513045576m_5252770544937976852h5"><div class="gmail_extra"><br><div class="gmail_quote">On Mon, Jul 24, 2017 at 4:45 PM, Houjun Wang - NOAA Affiliate <span dir="ltr"><<a href="mailto:houjun.wang@noaa.gov" target="_blank">houjun.wang@noaa.gov</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div dir="ltr"><div style="font-size:12.8px"><span style="font-size:12.8px">In /scratch3/NCEPDEV/swpc/</span><span style="font-size:12.8px">noscrub<wbr>/swpc.spacepara/</span><span style="font-size:12.8px">archive/ipe</span></div><div style="font-size:12.8px"><span style="font-size:12.8px"><br></span></div><div style="font-size:12.8px"><span style="font-size:12.8px">1. The following are already saved:</span></div><div style="font-size:12.8px"><ul><li style="margin-left:15px">plasmaXX: <br></li><li style="margin-left:15px">ut_rec<br></li><li style="margin-left:15px">IPE.inp<br></li><li style="margin-left:15px">stupXX <br></li></ul><div>Note: Since stup* files are from previous run, they are already saved in the previous (6 hours earlier) run dir. The soft link in the current run dir are for the NEXT run. I will remove these soft link <span style="font-size:12.8px">(and change my run scripts accordingly), </span><span style="font-size:12.8px">because this can be confusing. </span></div><div><br></div><div>2. The following will be saved in the future:</div><ul><li style="margin-left:15px">FLIP_ERR<br></li><li style="margin-left:15px">logfile_input_params.log<br></li></ul><div><br></div><div>3. The following are saved to mass storage (HPSS): they are called 'dayfile' which contain both output:</div><span><ul><li style="margin-left:15px">standard output<br></li><li style="margin-left:15px">standard error output</li></ul><div><br></div></span><div>I have saved the entire rundir for two runs in:</div><div><br></div><div><span style="font-size:12.8px">/scratch3/NCEPDEV/swpc/</span><span style="font-size:12.8px">noscrub<wbr>/swpc.spacepara/</span><span style="font-size:12.8px">archive/</span><span style="font-variant-ligatures:no-common-ligatures;color:rgb(0,0,0);font-family:Menlo;font-size:11px">wam201<wbr>7071606gdasfcst1</span><br></div>
<div><span style="font-size:12.8px">/scratch3/NCEPDEV/swpc/</span><span style="font-size:12.8px">noscrub<wbr>/swpc.spacepara/</span><span style="font-size:12.8px">archive/</span><span style="font-variant-ligatures:no-common-ligatures;color:rgb(0,0,0);font-family:Menlo;font-size:11px">wam201<wbr>7071612gdasfcst1</span><span style="font-size:12.8px"><br></span></div>
<div><span style="font-size:12.8px"><br></span></div><div><span style="font-size:12.8px">and the dayfile:</span></div><div><span style="font-size:12.8px"><br></span></div><div><span style="font-size:12.8px">/scratch3/NCEPDEV/swpc/</span><span style="font-size:12.8px">noscrub<wbr>/swpc.spacepara/</span><span style="font-size:12.8px">archive/</span><span style="font-variant-ligatures:no-common-ligatures;color:rgb(0,0,0);font-family:Menlo;font-size:11px">wam201<wbr>7071606gdasfcst1_0.dayfile</span><span style="font-size:12.8px"><br></span></div>
<div><span style="font-size:12.8px">/scratch3/NCEPDEV/swpc/</span><span style="font-size:12.8px">noscrub<wbr>/swpc.spacepara/</span><span style="font-size:12.8px">archive/</span><span style="font-variant-ligatures:no-common-ligatures;color:rgb(0,0,0);font-family:Menlo;font-size:11px">wam201<wbr>7071612gdasfcst1_0.dayfile</span><span style="font-size:12.8px"><br></span></div>
<div><span style="font-size:12.8px"><br></span></div><div><span style="font-size:12.8px">and the figs of NmF2 in</span></div><div><span style="font-size:12.8px"><br></span></div><div><span style="font-size:12.8px">/scratch3/NCEPDEV/swpc/</span><span style="font-size:12.8px">noscrub<wbr>/swpc.spacepara/</span><span style="font-size:12.8px">archive/fig/</span><span style="font-size:12.8px"><br></span></div><div><br></div><div>Let me know if I missed anything.</div><div><br></div><div>(I will compare NmF2 in the forecast and in the initial conditions used for restart.)</div><span class="m_5497443022798293325m_5352177521349815449m_-664132412513045576m_5252770544937976852m_-667109556565738712HOEnZb"><font color="#888888"><div><br></div></font></span></div></div><div class="gmail_extra"><span class="m_5497443022798293325m_5352177521349815449m_-664132412513045576m_5252770544937976852m_-667109556565738712HOEnZb"><font color="#888888"><br clear="all"><div><div class="m_5497443022798293325m_5352177521349815449m_-664132412513045576m_5252770544937976852m_-667109556565738712m_3064015471560353758gmail_signature" data-smartmail="gmail_signature"><div dir="ltr"><div><div dir="ltr">Houjun Wang</div></div></div></div></div></font></span><div><div class="m_5497443022798293325m_5352177521349815449m_-664132412513045576m_5252770544937976852m_-667109556565738712h5">
<br><div class="gmail_quote">On Thu, Jul 20, 2017 at 1:23 PM, Naomi Maruyama - NOAA Affiliate <span dir="ltr"><<a href="mailto:naomi.maruyama@noaa.gov" target="_blank">naomi.maruyama@noaa.gov</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div dir="ltr"><span style="font-size:12.8px">Houjun and Adam,</span><div><span style="font-size:12.8px"><br></span></div><div><span style="font-size:12.8px">here is a list of files I would like to suggest to be saved under your archive(</span><span style="font-size:12.8px">/scratch3/NCEPDEV/swpc<wbr>/</span><span style="font-size:12.8px">noscrub/swpc.spacepara/</span><span style="font-size:12.8px">archiv<wbr>e/ipe</span><span style="font-size:12.8px">)</span></div><div><span style="font-size:12.8px"><br></span></div><div><ul><li>plasmaXX<br></li><li>ut_rec<br></li><li>IPE.inp<br></li><li>stupXX<br></li><li>FLIP_ERR<br></li><li>logfile_input_params.log<br></li><li>standard output<br></li><li>standard error output<br></li></ul></div><div><br></div><div><br></div><div>Theses files would be helpful if you want me to look at your runs and verify the results.</div><div style="font-size:12.8px"><span style="font-size:12.8px"><br></span></div><div style="font-size:12.8px"><span style="font-size:12.8px">Thanks.</span></div><div style="font-size:12.8px"><span style="font-size:12.8px">naomi</span></div><div style="font-size:12.8px"> </div><div style="font-size:12.8px"><br></div><div style="font-size:12.8px"><br></div><div class="gmail_extra"><div class="gmail_quote">On Wed, Jul 12, 2017 at 2:30 PM, Adam Kubaryk - NOAA Affiliate <span dir="ltr"><<a href="mailto:adam.kubaryk@noaa.gov" target="_blank">adam.kubaryk@noaa.gov</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex"><div dir="ltr">Hi Naomi and Houjun,<div><br></div><div>I'll chime in quickly on the parallel script workflow.</div><div><br></div><div>That para_config file is used to submit a job that:</div><div><br></div><div>runs /scratch3/NCEPDEV/swpc/svn/gfs<wbr>/branches/gfs_workflow.v2.0.0/<wbr>para/jobs/fcst.sh<br></div><div>fcst.sh immediately calls the para_config before running anything else<br></div><div>para_config then calls /scratch3/NCEPDEV/swpc/svn/gfs<wbr>/branches/gfs_workflow.v2.0.0/<wbr>para/ush/reconcile.sh<br></div><div>after reconcile.sh, para_config finishes as well, and then fcst.sh runs<br></div><div>fcst.sh calls /scratch3/NCEPDEV/swpc/svn/gfs<wbr>/branches/global_shared.v14.0.<wbr>0/scripts/exglobal_fcst_nems.s<wbr>h.ecf-wam-ipe_wdas_iau2<br><br></div><div>A lot of what's relevant to IPE itself (copying in or linking files to the RUNDIR, setting up the namelists, etc.) is going to occur in that final exglobal script.<br><br></div><div>Let me know if there's anything else I can clarify.<br><br></div><div>Best,<br></div><div>Adam<br></div></div><div class="gmail_extra"><br><div class="gmail_quote"><div><div class="m_5497443022798293325m_5352177521349815449m_-664132412513045576m_5252770544937976852m_-667109556565738712m_3064015471560353758m_3585309678410128332gmail-m_3307647602575452036gmail-h5">On Wed, Jul 12, 2017 at 4:22 PM, Houjun Wang - NOAA Affiliate <span dir="ltr"><<a href="mailto:houjun.wang@noaa.gov" target="_blank">houjun.wang@noaa.gov</a>></span> wrote:<br></div></div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex"><div><div class="m_5497443022798293325m_5352177521349815449m_-664132412513045576m_5252770544937976852m_-667109556565738712m_3064015471560353758m_3585309678410128332gmail-m_3307647602575452036gmail-h5"><div dir="ltr">1. Yes, we have hourly output from ipe and since this WDAS-IAU cycled runs, each run only have 12 hour duration (and since ipe doesn't output the last time step - George know this well and may have a fix for it now - it does't have 15 UT for example).<div><br></div><div>So this is not an issue.</div><div>
<p class="m_5497443022798293325m_5352177521349815449m_-664132412513045576m_5252770544937976852m_-667109556565738712m_3064015471560353758m_3585309678410128332gmail-m_3307647602575452036gmail-m_-3900338790943649391m_-2897043307068363127gmail-m_3460520077816139387gmail-p1"><span class="m_5497443022798293325m_5352177521349815449m_-664132412513045576m_5252770544937976852m_-667109556565738712m_3064015471560353758m_3585309678410128332gmail-m_3307647602575452036gmail-m_-3900338790943649391m_-2897043307068363127gmail-m_3460520077816139387gmail-s1">2. The source code is in </span></p><p class="m_5497443022798293325m_5352177521349815449m_-664132412513045576m_5252770544937976852m_-667109556565738712m_3064015471560353758m_3585309678410128332gmail-m_3307647602575452036gmail-m_-3900338790943649391m_-2897043307068363127gmail-m_3460520077816139387gmail-p1">/scratch3/NCEPDEV/swpc/svn/nem<wbr>s/WAM-IPE_NEMS201606_IAU<br></p><p class="m_5497443022798293325m_5352177521349815449m_-664132412513045576m_5252770544937976852m_-667109556565738712m_3064015471560353758m_3585309678410128332gmail-m_3307647602575452036gmail-m_-3900338790943649391m_-2897043307068363127gmail-m_3460520077816139387gmail-p1"><span class="m_5497443022798293325m_5352177521349815449m_-664132412513045576m_5252770544937976852m_-667109556565738712m_3064015471560353758m_3585309678410128332gmail-m_3307647602575452036gmail-m_-3900338790943649391m_-2897043307068363127gmail-m_3460520077816139387gmail-s1">see especially the mods in</span></p><p class="m_5497443022798293325m_5352177521349815449m_-664132412513045576m_5252770544937976852m_-667109556565738712m_3064015471560353758m_3585309678410128332gmail-m_3307647602575452036gmail-m_-3900338790943649391m_-2897043307068363127gmail-m_3460520077816139387gmail-p1"><span class="m_5497443022798293325m_5352177521349815449m_-664132412513045576m_5252770544937976852m_-667109556565738712m_3064015471560353758m_3585309678410128332gmail-m_3307647602575452036gmail-m_-3900338790943649391m_-2897043307068363127gmail-m_3460520077816139387gmail-s1">/scratch3/NCEPDEV/swpc/svn/nem<wbr>s/WAM-IPE_NEMS201606_IAU/IPELI<wbr>B/src/plasma/</span><span style="font-variant-ligatures:no-common-ligatures;color:rgb(0,0,0);font-family:Menlo;font-size:11px">io_plasma_bin.f90</span></p>
<p class="m_5497443022798293325m_5352177521349815449m_-664132412513045576m_5252770544937976852m_-667109556565738712m_3064015471560353758m_3585309678410128332gmail-m_3307647602575452036gmail-m_-3900338790943649391m_-2897043307068363127gmail-m_3460520077816139387gmail-p1"><span class="m_5497443022798293325m_5352177521349815449m_-664132412513045576m_5252770544937976852m_-667109556565738712m_3064015471560353758m_3585309678410128332gmail-m_3307647602575452036gmail-m_-3900338790943649391m_-2897043307068363127gmail-m_3460520077816139387gmail-s1">for initializing ipe from ipe output from previous cycle in WDAS-IAU.<br></span></p><p class="m_5497443022798293325m_5352177521349815449m_-664132412513045576m_5252770544937976852m_-667109556565738712m_3064015471560353758m_3585309678410128332gmail-m_3307647602575452036gmail-m_-3900338790943649391m_-2897043307068363127gmail-m_3460520077816139387gmail-p1">I added another option "sw_record_number=2" for this, see IPE.inp for more details and other changes. I also reset record number to zero for each run in WDAS-IAU cycles to make it more practical for this purpose.</p><p class="m_5497443022798293325m_5352177521349815449m_-664132412513045576m_5252770544937976852m_-667109556565738712m_3064015471560353758m_3585309678410128332gmail-m_3307647602575452036gmail-m_-3900338790943649391m_-2897043307068363127gmail-m_3460520077816139387gmail-p1"><span class="m_5497443022798293325m_5352177521349815449m_-664132412513045576m_5252770544937976852m_-667109556565738712m_3064015471560353758m_3585309678410128332gmail-m_3307647602575452036gmail-m_-3900338790943649391m_-2897043307068363127gmail-m_3460520077816139387gmail-s1">3. Now, since I am using EMC para workflow, there is not just one script.</span></p><p class="m_5497443022798293325m_5352177521349815449m_-664132412513045576m_5252770544937976852m_-667109556565738712m_3064015471560353758m_3585309678410128332gmail-m_3307647602575452036gmail-m_-3900338790943649391m_-2897043307068363127gmail-m_3460520077816139387gmail-p1"><span class="m_5497443022798293325m_5352177521349815449m_-664132412513045576m_5252770544937976852m_-667109556565738712m_3064015471560353758m_3585309678410128332gmail-m_3307647602575452036gmail-m_-3900338790943649391m_-2897043307068363127gmail-m_3460520077816139387gmail-s1">The config file I am using is:</span></p><p class="m_5497443022798293325m_5352177521349815449m_-664132412513045576m_5252770544937976852m_-667109556565738712m_3064015471560353758m_3585309678410128332gmail-m_3307647602575452036gmail-m_-3900338790943649391m_-2897043307068363127gmail-m_3460520077816139387gmail-p1"><span class="m_5497443022798293325m_5352177521349815449m_-664132412513045576m_5252770544937976852m_-667109556565738712m_3064015471560353758m_3585309678410128332gmail-m_3307647602575452036gmail-m_-3900338790943649391m_-2897043307068363127gmail-m_3460520077816139387gmail-s1">
</span></p><p class="m_5497443022798293325m_5352177521349815449m_-664132412513045576m_5252770544937976852m_-667109556565738712m_3064015471560353758m_3585309678410128332gmail-m_3307647602575452036gmail-m_-3900338790943649391m_-2897043307068363127gmail-m_3460520077816139387gmail-p1"><span class="m_5497443022798293325m_5352177521349815449m_-664132412513045576m_5252770544937976852m_-667109556565738712m_3064015471560353758m_3585309678410128332gmail-m_3307647602575452036gmail-m_-3900338790943649391m_-2897043307068363127gmail-m_3460520077816139387gmail-s1">/scratch3/NCEPDEV/swpc/save/sw<wbr>pc.spacepara/para/</span><span style="font-variant-ligatures:no-common-ligatures;color:rgb(0,0,0);font-family:Menlo;font-size:11px">para_config_<wbr>wam_ipe_wdas_iau</span></p>
<p class="m_5497443022798293325m_5352177521349815449m_-664132412513045576m_5252770544937976852m_-667109556565738712m_3064015471560353758m_3585309678410128332gmail-m_3307647602575452036gmail-m_-3900338790943649391m_-2897043307068363127gmail-m_3460520077816139387gmail-p1"><span class="m_5497443022798293325m_5352177521349815449m_-664132412513045576m_5252770544937976852m_-667109556565738712m_3064015471560353758m_3585309678410128332gmail-m_3307647602575452036gmail-m_-3900338790943649391m_-2897043307068363127gmail-m_3460520077816139387gmail-s1">which defines all the runs.</span></p><p class="m_5497443022798293325m_5352177521349815449m_-664132412513045576m_5252770544937976852m_-667109556565738712m_3064015471560353758m_3585309678410128332gmail-m_3307647602575452036gmail-m_-3900338790943649391m_-2897043307068363127gmail-m_3460520077816139387gmail-p1"><span class="m_5497443022798293325m_5352177521349815449m_-664132412513045576m_5252770544937976852m_-667109556565738712m_3064015471560353758m_3585309678410128332gmail-m_3307647602575452036gmail-m_-3900338790943649391m_-2897043307068363127gmail-m_3460520077816139387gmail-s1">Kate wrote some notes on using EMC para scripts/workflow for wam/wdas:</span></p><p class="m_5497443022798293325m_5352177521349815449m_-664132412513045576m_5252770544937976852m_-667109556565738712m_3064015471560353758m_3585309678410128332gmail-m_3307647602575452036gmail-m_-3900338790943649391m_-2897043307068363127gmail-m_3460520077816139387gmail-p1"><span class="m_5497443022798293325m_5352177521349815449m_-664132412513045576m_5252770544937976852m_-667109556565738712m_3064015471560353758m_3585309678410128332gmail-m_3307647602575452036gmail-m_-3900338790943649391m_-2897043307068363127gmail-m_3460520077816139387gmail-s1"><a href="https://docs.google.com/a/noaa.gov/document/d/1OmlGZc0WQy8kdjdPWqHLQZUVn47fXqTn41rbgyrCguc/edit?usp=sharing" style="font-size:12.8px" target="_blank">https://docs.google.com/a/noaa<wbr>.gov/document/d/1OmlGZc0WQy8kd<wbr>jdPWqHLQZUVn47fXqTn41rbgyrCguc<wbr>/edit?usp=sharing</a><br></span></p><p class="m_5497443022798293325m_5352177521349815449m_-664132412513045576m_5252770544937976852m_-667109556565738712m_3064015471560353758m_3585309678410128332gmail-m_3307647602575452036gmail-m_-3900338790943649391m_-2897043307068363127gmail-m_3460520077816139387gmail-p1">l'll see if I can answer if you have questions.</p></div></div><div class="gmail_extra"><span class="m_5497443022798293325m_5352177521349815449m_-664132412513045576m_5252770544937976852m_-667109556565738712m_3064015471560353758m_3585309678410128332gmail-m_3307647602575452036gmail-m_-3900338790943649391HOEnZb"><font color="#888888"><br clear="all"><div><div class="m_5497443022798293325m_5352177521349815449m_-664132412513045576m_5252770544937976852m_-667109556565738712m_3064015471560353758m_3585309678410128332gmail-m_3307647602575452036gmail-m_-3900338790943649391m_-2897043307068363127gmail_signature"><div dir="ltr"><div><div dir="ltr">Houjun Wang</div></div></div></div></div></font></span><div><div class="m_5497443022798293325m_5352177521349815449m_-664132412513045576m_5252770544937976852m_-667109556565738712m_3064015471560353758m_3585309678410128332gmail-m_3307647602575452036gmail-m_-3900338790943649391h5">
<br><div class="gmail_quote">On Wed, Jul 12, 2017 at 1:24 PM, Naomi Maruyama - NOAA Affiliate <span dir="ltr"><<a href="mailto:naomi.maruyama@noaa.gov" target="_blank">naomi.maruyama@noaa.gov</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex"><div dir="ltr">Houjun,<div><br></div><div>Thank you very much for your kindly sharing your output files.</div><div><br></div><div>I have a feeling that your IPE output files were generated from only 3UT to 14UT only for each day, after looking at some of your IPE ARCHIVE directory.</div><div><br></div><div>In order to understand this potential issue in further detail, I would need to understand how your restart of IPE has been set up in your script and source code. Would you mind sharing your script and source code with which you have generated these output files?</div><div><br></div><div>Thanks.</div><div>naomi</div><div><br></div><div><br><div><br></div></div></div><div class="gmail_extra"><div><div class="m_5497443022798293325m_5352177521349815449m_-664132412513045576m_5252770544937976852m_-667109556565738712m_3064015471560353758m_3585309678410128332gmail-m_3307647602575452036gmail-m_-3900338790943649391m_-2897043307068363127h5"><br><div class="gmail_quote">On Tue, Jul 11, 2017 at 3:49 PM, Houjun Wang - NOAA Affiliate <span dir="ltr"><<a href="mailto:houjun.wang@noaa.gov" target="_blank">houjun.wang@noaa.gov</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex"><div dir="ltr"><div>Hello,</div><div><br></div><div>Some info on realtime wam-ipe runs on theia:</div><div><br></div><div>1) RUNDIR (this is temporary dir and it could be gone anytime)</div><div><br></div><div><div>/scratch4/NCEPDEV/stmp4/swpc.s<wbr>pacepara/wam2017070506gdasfcst<wbr>1</div></div><div><br></div><div>2) ARCHIVE (not all files are saved for ipe; what else should be saved?)</div><div><br></div><div><div>/scratch3/NCEPDEV/swpc/noscrub<wbr>/swpc.spacepara/archive/ipe</div></div><div><br></div><div>3) HPSS ARCHIVE (George can get ICs for WAM here):</div><div><br></div><div>/5year/NCEPDEV/swpc-para/swpc.<wbr>spacepara/THEIA/prwam_ipe<br></div><div><br></div><div>Let me know if you have any questions or suggestions.</div><div><br></div><div>Best,</div><div><br></div><div><div class="m_5497443022798293325m_5352177521349815449m_-664132412513045576m_5252770544937976852m_-667109556565738712m_3064015471560353758m_3585309678410128332gmail-m_3307647602575452036gmail-m_-3900338790943649391m_-2897043307068363127m_3873999350302384944m_-6687529716373526668gmail_signature"><div dir="ltr"><div><div dir="ltr">Houjun Wang</div></div></div></div></div>
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CIRES, Univ. of Colorado Boulder
NOAA Space Weather Prediction Center
phone: <a href="tel:%28303%29%20497-4857" value="+13034974857" target="_blank">+1 303.497.4857</a>
email: <a href="mailto:naomi.maruyama@noaa.gov" target="_blank">naomi.maruyama@noaa.gov</a>
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<br></div></div>______________________________<wbr>_________________<br>
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<a href="https://www.lstsrv.ncep.noaa.gov/mailman/listinfo/wam-ipe" rel="noreferrer" target="_blank">https://www.lstsrv.ncep.noaa.g<wbr>ov/mailman/listinfo/wam-ipe</a><br>
<br></blockquote></div><br></div><span class="m_5497443022798293325m_5352177521349815449m_-664132412513045576m_5252770544937976852m_-667109556565738712m_3064015471560353758HOEnZb"><font color="#888888">
</font></span></blockquote></div><span class="m_5497443022798293325m_5352177521349815449m_-664132412513045576m_5252770544937976852m_-667109556565738712m_3064015471560353758HOEnZb"><font color="#888888"><br><br clear="all"><div><br></div>-- <br><div class="m_5497443022798293325m_5352177521349815449m_-664132412513045576m_5252770544937976852m_-667109556565738712m_3064015471560353758m_3585309678410128332gmail-m_3307647602575452036gmail_signature"><div dir="ltr"><span><font color="#888888"><pre cols="72">Naomi Maruyama
CIRES, Univ. of Colorado Boulder
NOAA Space Weather Prediction Center
phone: <a href="tel:%28303%29%20497-4857" value="+13034974857" target="_blank">+1 303.497.4857</a>
email: <a href="mailto:naomi.maruyama@noaa.gov" target="_blank">naomi.maruyama@noaa.gov</a>
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CIRES, Univ. of Colorado Boulder
NOAA Space Weather Prediction Center
phone: <a href="tel:%28303%29%20497-4857" value="+13034974857" target="_blank">+1 303.497.4857</a>
email: <a href="mailto:naomi.maruyama@noaa.gov" target="_blank">naomi.maruyama@noaa.gov</a>
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</blockquote></div><br><br clear="all"><div><br></div>-- <br><div class="m_5497443022798293325m_5352177521349815449m_-664132412513045576gmail_signature" data-smartmail="gmail_signature"><div dir="ltr"><span><font color="#888888"><pre cols="72">Naomi Maruyama
CIRES, Univ. of Colorado Boulder
NOAA Space Weather Prediction Center
phone: <a href="tel:%28303%29%20497-4857" value="+13034974857" target="_blank">+1 303.497.4857</a>
email: <a href="mailto:naomi.maruyama@noaa.gov" target="_blank">naomi.maruyama@noaa.gov</a>
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</div></div></blockquote></div><br><br clear="all"><div><br></div>-- <br><div class="m_5497443022798293325m_5352177521349815449gmail_signature" data-smartmail="gmail_signature"><div dir="ltr"><span><font color="#888888"><pre cols="72">Naomi Maruyama
CIRES, Univ. of Colorado Boulder
NOAA Space Weather Prediction Center
phone: <a href="tel:%28303%29%20497-4857" value="+13034974857" target="_blank">+1 303.497.4857</a>
email: <a href="mailto:naomi.maruyama@noaa.gov" target="_blank">naomi.maruyama@noaa.gov</a>
</pre>
</font></span></div></div>
</div>
</div></blockquote></div></div></div></blockquote></div><br><br clear="all"><div><br></div>-- <br><div class="m_5497443022798293325gmail_signature" data-smartmail="gmail_signature"><div dir="ltr"><span><font color="#888888"><pre cols="72">Naomi Maruyama
CIRES, Univ. of Colorado Boulder
NOAA Space Weather Prediction Center
phone: <a href="tel:%28303%29%20497-4857" value="+13034974857" target="_blank">+1 303.497.4857</a>
email: <a href="mailto:naomi.maruyama@noaa.gov" target="_blank">naomi.maruyama@noaa.gov</a>
</pre>
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