[Ncep.list.emc.fv3gfs_tickets] FV3GFS Ticket #10: fv3gfs workflow and utilities

[FV3GFS Trac Ticket]

#10: fv3gfs workflow and utilities
-----------------------------+--------------------------
  Reporter:  fanglin.yang@…  |      Owner:  fanglin yang
      Type:  task            |     Status:  new
  Priority:  major           |  Milestone:
 Component:  component1      |    Version:
Resolution:                  |   Keywords:
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Comment (by fanglin.yang@…):

 '''Reintegrated branch
 https://svnemc.ncep.noaa.gov/projects/fv3gfs/branches/fanglin.yang/trunk_r86472
 back to the trunk.''' The major changes are:

 1. Update fregrid to speed up post-processing (Thanks to Rusty Benson).

 2. Update fv3nc2nemsio.fd and diag_table to add more fields to model
 output.

 3. Add regrid_nemsio.fd provided by Jeff Whitaker. It converts fv3gfs
 6-face output in ncetcdf to global lat-lon Gaussian grid in nemsio format.
 Further modifications were made to handle FH00 output and read model
 vertical coordinate from a text file.

 4. Added script fv3gfs_regrid_nemsio.sh for running regrid_nemsio.

 5. Updated configure files in gfs_workflow.v15.0.0/para/exp_fv3gfs to
 allow users to use either fregrid or regrid_nemsio  for remapping.  In
 para_config set REMAP_GRID=latlon to use fregrid and REMAP_GRID=gaussian
 to use regrid_nemsio. Note regrid_nemsio is required for running cycled
 experiments but it still cannot process all model output especially flx
 fields.

 6. Updated POST and other scripts to improve workflow performance.

 7. Synced certain files to Q3FY17 superstructure packages.


 -----------

 SURGE-slogin1 > svn -m "reintegrate Fanglin branch back to the trunk"
 commit
 Sending        .
 Sending        gdas.v15.0.0
 Sending        gdas.v15.0.0/jobs
 Sending        gdas.v15.0.0/jobs/JGDAS_ANALYSIS_HIGH
 Sending        gdas.v15.0.0/jobs/JGDAS_ENKF_FCST
 Sending        gdas.v15.0.0/jobs/JGDAS_ENKF_INNOVATE_OBS
 Sending        gdas.v15.0.0/jobs/JGDAS_ENKF_POST
 Sending        gdas.v15.0.0/jobs/JGDAS_ENKF_SELECT_OBS
 Sending        gdas.v15.0.0/jobs/JGDAS_ENKF_UPDATE
 Sending        gdas.v15.0.0/scripts
 Sending        gdas.v15.0.0/scripts/exglobal_enkf_update.sh.ecf
 Sending        gdas.v15.0.0/sorc/enkf_update.fd/ncepnems_io.f90
 Sending        gfs.v15.0.0
 Sending        gfs.v15.0.0/jobs
 Sending        gfs.v15.0.0/scripts
 Sending        gfs.v15.0.0/ush
 Sending        gfs_workflow.v15.0.0
 Sending        gfs_workflow.v15.0.0/para
 Sending        gfs_workflow.v15.0.0/para/exp_fv3gfs/config.fcst
 Sending        gfs_workflow.v15.0.0/para/exp_fv3gfs/config.post
 Sending        gfs_workflow.v15.0.0/para/exp_fv3gfs/para_config
 Sending        gfs_workflow.v15.0.0/para/exp_fv3gfs/submit_fv3gfs.sh
 Sending        gfs_workflow.v15.0.0/para/jobs
 Sending        gfs_workflow.v15.0.0/para/jobs/JGFS_POST.sh
 Sending        gfs_workflow.v15.0.0/para/jobs/post.sh
 Sending        gfs_workflow.v15.0.0/para/scripts
 Sending        gfs_workflow.v15.0.0/para/ush
 Sending        global_shared.v15.0.0
 Sending        global_shared.v15.0.0/fix/fix_am
 Adding         global_shared.v15.0.0/parm/parm_fv3diag/diag_table_history
 Adding         global_shared.v15.0.0/parm/parm_fv3diag/variable_table.txt
 Sending        global_shared.v15.0.0/scripts
 Sending        global_shared.v15.0.0/scripts/exglobal_analysis.sh.ecf
 Sending        global_shared.v15.0.0/scripts/exglobal_fcst_fv3gfs.sh.ecf
 Sending        global_shared.v15.0.0/sorc/build_all.sh
 Sending        global_shared.v15.0.0/sorc/fre-
 nctools.fd/tools/shared/mpp_io.c
 Sending        global_shared.v15.0.0/sorc/fv3gfs.fd/BUILD/COMP_ALL_avx
 Sending        global_shared.v15.0.0/sorc/fv3nc2nemsio.fd/0readme
 Sending        global_shared.v15.0.0/sorc/fv3nc2nemsio.fd/fv3_main.f90
 Sending        global_shared.v15.0.0/sorc/fv3nc2nemsio.fd/fv3_module.f90
 Deleting       global_shared.v15.0.0/sorc/global_chgres.fd
 Sending        global_shared.v15.0.0/sorc/gsi.fd/ncepnems_io.f90
 Sending        global_shared.v15.0.0/sorc/regrid_nemsio.fd/Makefile
 Replacing
 global_shared.v15.0.0/sorc/regrid_nemsio.fd/Makefile.conf.cray
 Sending
 global_shared.v15.0.0/sorc/regrid_nemsio.fd/Makefile.dependency
 Adding         global_shared.v15.0.0/sorc/regrid_nemsio.fd/Makefile_cray
 Sending        global_shared.v15.0.0/sorc/regrid_nemsio.fd/constants.f90
 Deleting       global_shared.v15.0.0/sorc/regrid_nemsio.fd/diag_table
 Sending
 global_shared.v15.0.0/sorc/regrid_nemsio.fd/fv3_interface.f90
 Sending
 global_shared.v15.0.0/sorc/regrid_nemsio.fd/gfs_nems_interface.f90
 Sending
 global_shared.v15.0.0/sorc/regrid_nemsio.fd/interpolation_interface.f90
 Sending        global_shared.v15.0.0/sorc/regrid_nemsio.fd/main.f90
 Adding
 global_shared.v15.0.0/sorc/regrid_nemsio.fd/makefile_cray.sh
 Sending
 global_shared.v15.0.0/sorc/regrid_nemsio.fd/namelist_def.f90
 Sending
 global_shared.v15.0.0/sorc/regrid_nemsio.fd/netcdfio_interface.f90
 Sending
 global_shared.v15.0.0/sorc/regrid_nemsio.fd/variable_interface.f90
 Deleting
 global_shared.v15.0.0/sorc/regrid_nemsio.fd/variable_table.txt
 Sending        global_shared.v15.0.0/ush
 Sending        global_shared.v15.0.0/ush/fv3gfs_nc2nemsio.sh
 Adding         global_shared.v15.0.0/ush/fv3gfs_regrid_nemsio.sh
 Sending        global_shared.v15.0.0/ush/fv3gfs_remap.sh
 Sending        global_shared.v15.0.0/ush/global_chgres.sh
 Transmitting file data .........................
 Committed revision 88010.

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Ticket URL: <https://svnemc.ncep.noaa.gov/trac/fv3gfs/ticket/10#comment:6>
fv3gfs <https://svnemc.ncep.noaa.gov/trac/fv3gfs>
NGGPS FV3GFS Development